RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SLC9C2Q5TAH2 1124 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 ANKRD45Q5TZF3 282 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 SPRYD7Q5W111 196 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 ZSCAN29Q8IWY8 852 aaPredicted RBP12.26□□□□□ -0.45
TPM4-207ENST00000588032 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 TEX11Q8IYF3 940 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■□□□□ 10.7
TPM4-207ENST00000588032 AATFQ9NY61 560 aaKnown RBP eCLIP12.26□□□□□ -0.45
TPM4-207ENST00000588032 FZD1Q9UP38 647 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 CSADQ9Y600 493 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 RFX7Q2KHR2 1363 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
TPM4-207ENST00000588032 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
TPM4-207ENST00000588032 ERC2O15083 957 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 MAP3K10Q02779 954 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 SREBF2Q12772 1141 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 PICALMQ13492 652 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 ZSCAN25Q6NSZ9 544 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.25□□□□□ -0.45
TPM4-207ENST00000588032 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 ADGRA1Q86SQ6 560 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 ZFPM1Q8IX07 1006 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 SH3RF3Q8TEJ3 882 aaPredicted RBP12.25□□□□□ -0.45
TPM4-207ENST00000588032 CSRNP1Q96S65 589 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 DHX36Q9H2U1 1008 aaKnown RBP12.25□□□□□ -0.45
TPM4-207ENST00000588032 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
TPM4-207ENST00000588032 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
TPM4-207ENST00000588032 TBC1D12O60347 775 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 COL2A1P02458 1487 aaPredicted RBP12.24□□□□□ -0.45
TPM4-207ENST00000588032 TM4SF4P48230 202 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 VGLL4Q14135 290 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 WNK4Q96J92 1243 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 CLMNQ96JQ2 1002 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 WRNIP1Q96S55 665 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 ZIC5Q96T25 663 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 OSBPL5Q9H0X9 879 aaPredicted RBP12.24□□□□□ -0.45
TPM4-207ENST00000588032 SAGE1Q9NXZ1 904 aa12.24□□□□□ -0.45
TPM4-207ENST00000588032 DDTLA6NHG4 134 aaPredicted RBP12.23□□□□□ -0.45
TPM4-207ENST00000588032 FOXN1O15353 648 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 CAPN15O75808 1086 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
TPM4-207ENST00000588032 PDE6AP16499 860 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 UBE3CQ15386 1083 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 LRRFIP1Q32MZ4 808 aaKnown RBP12.23□□□□□ -0.45
TPM4-207ENST00000588032 SH3BP5LQ7L8J4 393 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 ERO1BQ86YB8 467 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 FOXP4Q8IVH2 680 aaPredicted RBP12.23□□□□□ -0.45
TPM4-207ENST00000588032 TGFBRAP1Q8WUH2 860 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 PRDM10Q9NQV6 1147 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 PI4KBQ9UBF8 816 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
TPM4-207ENST00000588032 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 TCRBV5S4A2TA0A5A2 114 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 SPDYE5A6NIY4 337 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
TPM4-207ENST00000588032 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 MX1P20591 662 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 ADD2P35612 726 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 NOL9Q5SY16 702 aaKnown RBP12.22□□□□□ -0.45
TPM4-207ENST00000588032 MIGA1Q8NAN2 632 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 OPTNQ96CV9 577 aa12.22□□□□□ -0.45
TPM4-207ENST00000588032 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
TPM4-207ENST00000588032 HERC5Q9UII4 1024 aaKnown RBP12.22□□□□□ -0.45
TPM4-207ENST00000588032 FLT1P17948 1338 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 IGHDP01880 384 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 ZFYP08048 801 aaPredicted RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 USP5P45974 858 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 GTF2A2P52657 109 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 DYNLL1P63167 89 aaKnown RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 PPATQ06203 517 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 KBTBD3Q8NAB2 608 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 ZKSCAN4Q969J2 545 aaPredicted RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 RIOK1Q9BRS2 568 aaKnown RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 CRNKL1Q9BZJ0 848 aaKnown RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.21□□□□□ -0.45
TPM4-207ENST00000588032 RNF186Q9NXI6 227 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
TPM4-207ENST00000588032 STAP2Q9UGK3 403 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 SNCAIPQ9Y6H5 919 aa12.21□□□□□ -0.45
TPM4-207ENST00000588032 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
TPM4-207ENST00000588032 TRPA1O75762 1119 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 HLA-DOAP06340 250 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 HSPA8P11142 646 aaKnown RBP12.2□□□□□ -0.46
TPM4-207ENST00000588032 INPP5BP32019 993 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 LBX1P52954 281 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 TTC6Q86TZ1 520 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
TPM4-207ENST00000588032 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 MAPKAPK5Q8IW41 473 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms