RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NBPF3Q9H094 633 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 TMX1Q9H3N1 280 aa21.38■■□□□ 1.01
DDX39A-206ENST00000587730 ITGA6P23229 1130 aa21.37■■□□□ 1.01
DDX39A-206ENST00000587730 MARCKSP29966 332 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-206ENST00000587730 HOMER1Q86YM7 354 aa21.37■■□□□ 1.01
DDX39A-206ENST00000587730 CNNM3Q8NE01 707 aa21.37■■□□□ 1.01
DDX39A-206ENST00000587730 IGDCC4Q8TDY8 1250 aa21.37■■□□□ 1.01
DDX39A-206ENST00000587730 AIDAQ96BJ3 306 aa21.37■■□□□ 1.01
DDX39A-206ENST00000587730 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.37■■□□□ 1.01
DDX39A-206ENST00000587730 ARGLU1Q9NWB6 273 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-206ENST00000587730 KCNH3Q9ULD8 1083 aa21.37■■□□□ 1.01
DDX39A-206ENST00000587730 MROH5Q6ZUA9 1318 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 CCDC196A0A1B0GTZ2 297 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 ARHGAP6O43182 974 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 PDE8BO95263 885 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 FMNL1O95466 1100 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-206ENST00000587730 TOP1P11387 765 aaKnown RBP21.36■■□□□ 1.01
DDX39A-206ENST00000587730 PDE6AP16499 860 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 GNAT2P19087 354 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 SART3Q15020 963 aaKnown RBP21.36■■□□□ 1.01
DDX39A-206ENST00000587730 NTRK3Q16288 839 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 CFAP100Q494V2 611 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 CYB5R4Q7L1T6 521 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 TRIM22Q8IYM9 498 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 TMTC2Q8N394 836 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 VGLL2Q8N8G2 317 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 ZNF579Q8NAF0 562 aaKnown RBP21.36■■□□□ 1.01
DDX39A-206ENST00000587730 MLKLQ8NB16 471 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 BCL11BQ9C0K0 894 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-206ENST00000587730 CEP131Q9UPN4 1083 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.36■■□□□ 1.011e-7■■□□□ 11.4
DDX39A-206ENST00000587730 SLC12A7Q9Y666 1083 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 IFNAR1P17181 557 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 BMS1Q14692 1282 aaKnown RBP21.36■■□□□ 1.01
DDX39A-206ENST00000587730 ELF2Q15723 593 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 RILPL1Q5EBL4 403 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 SYT10Q6XYQ8 523 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 LY9Q9HBG7 655 aa21.36■■□□□ 1.01
DDX39A-206ENST00000587730 ZNF532Q9HCE3 1301 aa21.35■■□□□ 1.01
DDX39A-206ENST00000587730 PATL2C9JE40 543 aaKnown RBP21.35■■□□□ 1.01
DDX39A-206ENST00000587730 H2AFXP16104 143 aaPredicted RBP21.35■■□□□ 1.01
DDX39A-206ENST00000587730 PUM3Q15397 648 aaKnown RBP21.35■■□□□ 1.01
DDX39A-206ENST00000587730 FBXO38Q6PIJ6 1188 aa21.35■■□□□ 1.01
DDX39A-206ENST00000587730 NLRP10Q86W26 655 aa21.35■■□□□ 1.01
DDX39A-206ENST00000587730 NOSTRINQ8IVI9 506 aa21.35■■□□□ 1.01
DDX39A-206ENST00000587730 LPIN2Q92539 896 aa21.35■■□□□ 1.01
DDX39A-206ENST00000587730 STRBPQ96SI9 672 aaKnown RBP21.35■■□□□ 1.01
DDX39A-206ENST00000587730 FOXP1Q9H334 677 aaPredicted RBP21.35■■□□□ 1.01
DDX39A-206ENST00000587730 IDH1O75874 414 aaKnown RBP21.34■■□□□ 1.01
DDX39A-206ENST00000587730 MAP3K12Q12852 859 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 NAA30Q147X3 362 aaPredicted RBP21.34■■□□□ 1.01
DDX39A-206ENST00000587730 PPP2R5BQ15173 497 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 MICU3Q86XE3 530 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 HSD3B7Q9H2F3 369 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 TCRBV5S4A2TA0A5A2 114 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 B4E1Z4 1266 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 PDE8AO60658 829 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 NACAP1Q9BZK3 213 aa21.34■■□□□ 1.01
DDX39A-206ENST00000587730 PIH1D3Q9NQM4 214 aaKnown RBP21.34■■□□□ 1.01
DDX39A-206ENST00000587730 LRP6O75581 1613 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 UBN2Q6ZU65 1347 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 NT5DC1Q5TFE4 455 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 PI16Q6UXB8 463 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 NAPBQ9H115 298 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 GJB4Q9NTQ9 266 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 DNAI1Q9UI46 699 aa21.33■■□□□ 1.01
DDX39A-206ENST00000587730 TIAM2Q8IVF5 1701 aa21.33■■□□□ 1
DDX39A-206ENST00000587730 CDC27P30260 824 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 METTL16Q86W50 562 aaKnown RBP21.32■■□□□ 1
DDX39A-206ENST00000587730 GREM2Q9H772 168 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 AKAP11Q9UKA4 1901 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 SHANK3Q9BYB0 1731 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 ERVV-1B6SEH8 477 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 IRS4O14654 1257 aaPredicted RBP21.32■■□□□ 1
DDX39A-206ENST00000587730 IFIT3O14879 490 aaKnown RBP21.32■■□□□ 1
DDX39A-206ENST00000587730 ATP8B1O43520 1251 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 STX10O60499 249 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 MMP1P03956 469 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 SLC5A1P13866 664 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 PNOCQ13519 176 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
DDX39A-206ENST00000587730 ENOX1Q8TC92 643 aaKnown RBP21.32■■□□□ 1
DDX39A-206ENST00000587730 RNF41Q9H4P4 317 aaPredicted RBP21.32■■□□□ 1
DDX39A-206ENST00000587730 RGS17Q9UGC6 210 aaPredicted RBP21.32■■□□□ 1
DDX39A-206ENST00000587730 LRP5O75197 1615 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 ATP1A3P13637 1013 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 AKNAD1Q5T1N1 836 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 MNS1Q8NEH6 495 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 UBXN4Q92575 508 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 PHKBQ93100 1093 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 SLC26A6Q9BXS9 759 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 PCDHA5Q9Y5H7 936 aa21.31■■□□□ 1
DDX39A-206ENST00000587730 ERICH2A1L162 156 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 EFCAB8A8MWE9 144 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
DDX39A-206ENST00000587730 DEXIO95424 95 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 PTPREP23469 700 aa21.3■■□□□ 1
DDX39A-206ENST00000587730 POSTNQ15063 836 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms