RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ZNF765Q7L2R6 523 aa7.76□□□□□ -1.17
VMP1-205ENST00000587470 SMYD4Q8IYR2 804 aaPredicted RBP7.76□□□□□ -1.17
VMP1-205ENST00000587470 ANKRD24Q8TF21 1146 aa7.76□□□□□ -1.17
VMP1-205ENST00000587470 FRMD6Q96NE9 622 aa7.76□□□□□ -1.17
VMP1-205ENST00000587470 LGR6Q9HBX8 967 aa7.76□□□□□ -1.17
VMP1-205ENST00000587470 CBX8Q9HC52 389 aa7.76□□□□□ -1.17
VMP1-205ENST00000587470 FAM8A1Q9UBU6 413 aa7.76□□□□□ -1.17
VMP1-205ENST00000587470 ENC1O14682 589 aa7.75□□□□□ -1.17
VMP1-205ENST00000587470 LDHBP07195 334 aaKnown RBP7.75□□□□□ -1.17
VMP1-205ENST00000587470 BMP6P22004 513 aa7.75□□□□□ -1.17
VMP1-205ENST00000587470 ZC3H12AQ5D1E8 599 aaKnown RBP7.75□□□□□ -1.17
VMP1-205ENST00000587470 C12orf49Q9H741 205 aa7.75□□□□□ -1.17
VMP1-205ENST00000587470 RNGTTO60942 597 aaKnown RBP7.74□□□□□ -1.17
VMP1-205ENST00000587470 PDIA4P13667 645 aaKnown RBP7.74□□□□□ -1.17
VMP1-205ENST00000587470 TTLL4Q14679 1199 aa7.74□□□□□ -1.17
VMP1-205ENST00000587470 CYP27C1Q4G0S4 372 aa7.74□□□□□ -1.17
VMP1-205ENST00000587470 GPBAR1Q8TDU6 330 aa7.74□□□□□ -1.17
VMP1-205ENST00000587470 CACNA2D2Q9NY47 1150 aa7.74□□□□□ -1.17
VMP1-205ENST00000587470 PCOLCE2Q9UKZ9 415 aa7.74□□□□□ -1.17
VMP1-205ENST00000587470 PRNPP04156 253 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
VMP1-205ENST00000587470 TXKP42681 527 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 ERVK-24P63145 666 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 FGD1P98174 961 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 COL19A1Q14993 1142 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 AEBP1Q8IUX7 1158 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 ACSBG1Q96GR2 724 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 LRRC4CQ9HCJ2 640 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
VMP1-205ENST00000587470 CCDC39Q9UFE4 941 aa7.73□□□□□ -1.17
VMP1-205ENST00000587470 ANGEL1Q9UNK9 670 aaKnown RBP7.73□□□□□ -1.17
VMP1-205ENST00000587470 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 FBXO24O75426 580 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 PAGE1O75459 146 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 TRIM37O94972 964 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 USP17L7P0C7H9 530 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 LRRC14Q15048 493 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 SCARA3Q6AZY7 606 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 SND1Q7KZF4 910 aaKnown RBP eCLIP7.72□□□□□ -1.17
VMP1-205ENST00000587470 RNF214Q8ND24 703 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 GRIN3AQ8TCU5 1115 aa7.72□□□□□ -1.17
VMP1-205ENST00000587470 CDK5R2Q13319 367 aa7.71□□□□□ -1.18
VMP1-205ENST00000587470 MPRIPQ6WCQ1 1025 aa7.71□□□□□ -1.18
VMP1-205ENST00000587470 VSIG10LQ86VR7 867 aa7.71□□□□□ -1.18
VMP1-205ENST00000587470 ABI1Q8IZP0 508 aa7.71□□□□□ -1.18
VMP1-205ENST00000587470 FBXL18Q96ME1 805 aa7.71□□□□□ -1.18
VMP1-205ENST00000587470 ZC3H7BQ9UGR2 993 aaKnown RBP7.71□□□□□ -1.18
VMP1-205ENST00000587470 CYP8B1Q9UNU6 501 aa7.71□□□□□ -1.18
VMP1-205ENST00000587470 PRPF40AO75400 957 aaKnown RBP7.7□□□□□ -1.18
VMP1-205ENST00000587470 GNA15P30679 374 aa7.7□□□□□ -1.18
VMP1-205ENST00000587470 LLGL2Q6P1M3 1020 aa7.7□□□□□ -1.18
VMP1-205ENST00000587470 CBLL1Q75N03 491 aa7.7□□□□□ -1.18
VMP1-205ENST00000587470 ISL2Q96A47 359 aa7.7□□□□□ -1.18
VMP1-205ENST00000587470 SSU72Q9NP77 194 aaKnown RBP7.7□□□□□ -1.18
VMP1-205ENST00000587470 RNF114Q9Y508 228 aa7.7□□□□□ -1.18
VMP1-205ENST00000587470 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
VMP1-205ENST00000587470 NEFMP07197 916 aa7.69□□□□□ -1.18
VMP1-205ENST00000587470 FAM87AP0C7U9 286 aa7.69□□□□□ -1.18
VMP1-205ENST00000587470 EIF4BP23588 611 aaKnown RBP7.69□□□□□ -1.18
VMP1-205ENST00000587470 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
VMP1-205ENST00000587470 EAPPQ56P03 285 aaPredicted RBP7.68□□□□□ -1.18
VMP1-205ENST00000587470 PCNX4Q63HM2 1172 aa7.68□□□□□ -1.18
VMP1-205ENST00000587470 SV2BQ7L1I2 683 aa7.68□□□□□ -1.18
VMP1-205ENST00000587470 TTF2Q9UNY4 1162 aaKnown RBP7.68□□□□□ -1.18
VMP1-205ENST00000587470 AK5Q9Y6K8 562 aa7.68□□□□□ -1.18
VMP1-205ENST00000587470 DCDC2CA8MYV0 355 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 CELA3AP09093 270 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 PPM1JQ5JR12 505 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 RASIP1Q5U651 963 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 DUSP23Q9BVJ7 150 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 PCDHA4Q9UN74 947 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 CSADQ9Y600 493 aa7.67□□□□□ -1.18
VMP1-205ENST00000587470 ARID1BQ8NFD5 2236 aaPredicted RBP7.67□□□□□ -1.18
VMP1-205ENST00000587470 FANCGO15287 622 aa7.66□□□□□ -1.18
VMP1-205ENST00000587470 RING1Q06587 406 aa7.66□□□□□ -1.18
VMP1-205ENST00000587470 C12orf40Q86WS4 652 aa7.66□□□□□ -1.18
VMP1-205ENST00000587470 TP53INP2Q8IXH6 220 aa7.66□□□□□ -1.18
VMP1-205ENST00000587470 DUSP9Q99956 384 aaKnown RBP7.66□□□□□ -1.18
VMP1-205ENST00000587470 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
VMP1-205ENST00000587470 YBX3P16989 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
VMP1-205ENST00000587470 STK11IPQ8N1F8 1099 aa7.65□□□□□ -1.18
VMP1-205ENST00000587470 AGBL5Q8NDL9 886 aa7.65□□□□□ -1.18
VMP1-205ENST00000587470 NETO1Q8TDF5 533 aa7.65□□□□□ -1.18
VMP1-205ENST00000587470 MKNK2Q9HBH9 465 aa7.65□□□□□ -1.18
VMP1-205ENST00000587470 LEFTY1O75610 366 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 NTF4P34130 210 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 ZBTB37Q5TC79 503 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 CDC37L1Q7L3B6 337 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 FLCNQ8NFG4 579 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 ELMO3Q96BJ8 720 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 MISP3Q96FF7 219 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 PAK6Q9NQU5 681 aaPredicted RBP7.64□□□□□ -1.19
VMP1-205ENST00000587470 SLC5A6Q9Y289 635 aa7.64□□□□□ -1.19
VMP1-205ENST00000587470 RB1CC1Q8TDY2 1594 aa7.63□□□□□ -1.19
VMP1-205ENST00000587470 TTBK2Q6IQ55 1244 aa7.63□□□□□ -1.19
VMP1-205ENST00000587470 TOP6BLQ8N6T0 577 aa7.63□□□□□ -1.19
VMP1-205ENST00000587470 BCL7CQ8WUZ0 217 aaPredicted RBP7.63□□□□□ -1.19
VMP1-205ENST00000587470 ITGB5P18084 799 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms