RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
LRFN3-203ENST00000587257 PAK6Q9NQU5 681 aaPredicted RBP18.35■□□□□ 0.53
LRFN3-203ENST00000587257 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
LRFN3-203ENST00000587257 PHF20L1A8MW92 1017 aa18.34■□□□□ 0.53
LRFN3-203ENST00000587257 PTPRAP18433 802 aa18.34■□□□□ 0.53
LRFN3-203ENST00000587257 ZFPM1Q8IX07 1006 aa18.34■□□□□ 0.53
LRFN3-203ENST00000587257 CRISPLD2Q9H0B8 497 aa18.34■□□□□ 0.53
LRFN3-203ENST00000587257 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
LRFN3-203ENST00000587257 EYA2O00167 538 aa18.33■□□□□ 0.52
LRFN3-203ENST00000587257 NECAB2Q7Z6G3 386 aa18.33■□□□□ 0.52
LRFN3-203ENST00000587257 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
LRFN3-203ENST00000587257 COA7Q96BR5 231 aa18.33■□□□□ 0.52
LRFN3-203ENST00000587257 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.52
LRFN3-203ENST00000587257 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.52
LRFN3-203ENST00000587257 AFG3L2Q9Y4W6 797 aa18.33■□□□□ 0.52
LRFN3-203ENST00000587257 SALL1Q9NSC2 1324 aa18.32■□□□□ 0.52
LRFN3-203ENST00000587257 ENTPD3O75355 529 aa18.32■□□□□ 0.52
LRFN3-203ENST00000587257 RGS3P49796 1198 aa18.32■□□□□ 0.52
LRFN3-203ENST00000587257 LRRFIP2Q9Y608 721 aaKnown RBP18.32■□□□□ 0.52
LRFN3-203ENST00000587257 TRIM75PA6NK02 468 aa18.31■□□□□ 0.52
LRFN3-203ENST00000587257 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
LRFN3-203ENST00000587257 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
LRFN3-203ENST00000587257 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
LRFN3-203ENST00000587257 LAMA3Q16787 3333 aa18.31■□□□□ 0.52
LRFN3-203ENST00000587257 PTPRCP08575 1304 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 SEMA3EO15041 775 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 CTNND1O60716 968 aaKnown RBP18.3■□□□□ 0.52
LRFN3-203ENST00000587257 MNX1P50219 401 aaPredicted RBP18.3■□□□□ 0.52
LRFN3-203ENST00000587257 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 C7orf61Q8IZ16 206 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 ANKRD13CQ8N6S4 541 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 RFX7Q2KHR2 1363 aa18.3■□□□□ 0.52
LRFN3-203ENST00000587257 BMP8BP34820 402 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
LRFN3-203ENST00000587257 FAM110CQ1W6H9 321 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 GPR153Q6NV75 609 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
LRFN3-203ENST00000587257 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
LRFN3-203ENST00000587257 GDF15Q99988 308 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 USP44Q9H0E7 712 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
LRFN3-203ENST00000587257 GAKO14976 1311 aa18.28■□□□□ 0.52
LRFN3-203ENST00000587257 HMGCRP04035 888 aa18.28■□□□□ 0.52
LRFN3-203ENST00000587257 MAP3K10Q02779 954 aa18.28■□□□□ 0.52
LRFN3-203ENST00000587257 SH3BP5LQ7L8J4 393 aa18.28■□□□□ 0.52
LRFN3-203ENST00000587257 DZIP1Q86YF9 867 aaKnown RBP18.28■□□□□ 0.52
LRFN3-203ENST00000587257 ATG9AQ7Z3C6 839 aa18.27■□□□□ 0.52
LRFN3-203ENST00000587257 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
LRFN3-203ENST00000587257 DEFB123Q8N688 67 aa18.27■□□□□ 0.52
LRFN3-203ENST00000587257 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
LRFN3-203ENST00000587257 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
LRFN3-203ENST00000587257 ZMYND8Q9ULU4 1186 aaPredicted RBP18.27■□□□□ 0.52
LRFN3-203ENST00000587257 COL6A3P12111 3177 aa18.27■□□□□ 0.51
LRFN3-203ENST00000587257 MGAMO43451 1857 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 DDTLA6NHG4 134 aaPredicted RBP18.26■□□□□ 0.51
LRFN3-203ENST00000587257 CIAO1O76071 339 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 PHKA1P46020 1223 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 PICALMQ13492 652 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 SLF2Q8IX21 1173 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 PROCA1Q8NCQ7 364 aaPredicted RBP18.26■□□□□ 0.51
LRFN3-203ENST00000587257 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 SIL1Q9H173 461 aa18.26■□□□□ 0.51
LRFN3-203ENST00000587257 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.26■□□□□ 0.51
LRFN3-203ENST00000587257 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
LRFN3-203ENST00000587257 CCDC84Q86UT8 332 aaPredicted RBP18.25■□□□□ 0.51
LRFN3-203ENST00000587257 HMX1Q9NP08 348 aaPredicted RBP18.25■□□□□ 0.51
LRFN3-203ENST00000587257 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
LRFN3-203ENST00000587257 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
LRFN3-203ENST00000587257 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
LRFN3-203ENST00000587257 DDX4Q9NQI0 724 aaKnown RBP18.24■□□□□ 0.51
LRFN3-203ENST00000587257 STXBP5LQ9Y2K9 1186 aa18.24■□□□□ 0.51
LRFN3-203ENST00000587257 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 AK9Q5TCS8 1911 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 MYH13Q9UKX3 1938 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 ZBTB22O15209 634 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 BTDP43251 543 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
LRFN3-203ENST00000587257 TDHQ8IZJ6 230 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 FAM163AQ96GL9 167 aaPredicted RBP18.23■□□□□ 0.51
LRFN3-203ENST00000587257 C11orf49Q9H6J7 331 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 ABCF2Q9UG63 623 aa18.23■□□□□ 0.51
LRFN3-203ENST00000587257 DOCK1Q14185 1865 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 TBC1D12O60347 775 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 SYN1P17600 705 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
LRFN3-203ENST00000587257 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 Q7L0L9 218 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 ZNF280CQ8ND82 737 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 TBC1D2Q9BYX2 928 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 MROH7-TTC4A0A0A0MT08 1334 aa18.22■□□□□ 0.51
LRFN3-203ENST00000587257 PDS5AQ29RF7 1337 aaKnown RBP18.22■□□□□ 0.51
LRFN3-203ENST00000587257 A0A0C4DFX4 3053 aa18.21■□□□□ 0.51
LRFN3-203ENST00000587257 UBTFL1P0CB47 393 aaPredicted RBP18.21■□□□□ 0.51
LRFN3-203ENST00000587257 IL15P40933 162 aaPredicted RBP18.21■□□□□ 0.51
LRFN3-203ENST00000587257 SPP2Q13103 211 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms