RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 CHRDL2Q6WN34 429 aa20.33■□□□□ 0.85
NPC1-205ENST00000587163 PRRT2Q7Z6L0 340 aaPredicted RBP20.33■□□□□ 0.85
NPC1-205ENST00000587163 RNF208Q9H0X6 261 aa20.33■□□□□ 0.85
NPC1-205ENST00000587163 BIN2Q9UBW5 565 aaPredicted RBP20.33■□□□□ 0.85
NPC1-205ENST00000587163 AFG3L2Q9Y4W6 797 aa20.33■□□□□ 0.85
NPC1-205ENST00000587163 LRRFIP2Q9Y608 721 aaKnown RBP20.33■□□□□ 0.85
NPC1-205ENST00000587163 MGAMO43451 1857 aa20.33■□□□□ 0.84
NPC1-205ENST00000587163 TRIOBPQ9H2D6 2365 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 GAKO14976 1311 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 DDTLA6NHG4 134 aaPredicted RBP20.32■□□□□ 0.84
NPC1-205ENST00000587163 ENTPD3O75355 529 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
NPC1-205ENST00000587163 FCGRTP55899 365 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 TIMM10P62072 90 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 MAP3K10Q02779 954 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 NKX2-3Q8TAU0 364 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 DDX4Q9NQI0 724 aaKnown RBP20.32■□□□□ 0.84
NPC1-205ENST00000587163 PICK1Q9NRD5 415 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 RFX7Q2KHR2 1363 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 DOCK2Q92608 1830 aa20.32■□□□□ 0.84
NPC1-205ENST00000587163 GADL1Q6ZQY3 521 aa20.31■□□□□ 0.84
NPC1-205ENST00000587163 FASTKD5Q7L8L6 764 aaKnown RBP20.31■□□□□ 0.84
NPC1-205ENST00000587163 ZSCAN29Q8IWY8 852 aaPredicted RBP20.31■□□□□ 0.84
NPC1-205ENST00000587163 UNC93B1Q9H1C4 597 aa20.31■□□□□ 0.84
NPC1-205ENST00000587163 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
NPC1-205ENST00000587163 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.31■□□□□ 0.84
NPC1-205ENST00000587163 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
NPC1-205ENST00000587163 SZT2Q5T011 3432 aa20.3■□□□□ 0.84
NPC1-205ENST00000587163 ZBTB22O15209 634 aa20.3■□□□□ 0.84
NPC1-205ENST00000587163 RASGRF1Q13972 1273 aa20.3■□□□□ 0.84
NPC1-205ENST00000587163 FAM163AQ96GL9 167 aaPredicted RBP20.3■□□□□ 0.84
NPC1-205ENST00000587163 COPRSQ9NQ92 184 aa20.3■□□□□ 0.84
NPC1-205ENST00000587163 ABCF2Q9UG63 623 aa20.3■□□□□ 0.84
NPC1-205ENST00000587163 UBXN2AP68543 259 aa20.29■□□□□ 0.84
NPC1-205ENST00000587163 CCDC84Q86UT8 332 aaPredicted RBP20.29■□□□□ 0.84
NPC1-205ENST00000587163 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
NPC1-205ENST00000587163 TRMT2AQ8IZ69 625 aaKnown RBP20.29■□□□□ 0.84
NPC1-205ENST00000587163 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
NPC1-205ENST00000587163 SLAIN1Q8ND83 568 aa20.29■□□□□ 0.84
NPC1-205ENST00000587163 U2AF1L4Q8WU68 220 aaKnown RBP20.29■□□□□ 0.84
NPC1-205ENST00000587163 PHIPQ8WWQ0 1821 aa20.28■□□□□ 0.84
NPC1-205ENST00000587163 ADCY3O60266 1144 aa20.28■□□□□ 0.84
NPC1-205ENST00000587163 CTNND1O60716 968 aaKnown RBP20.28■□□□□ 0.84
NPC1-205ENST00000587163 ELNP15502 786 aa20.28■□□□□ 0.84
NPC1-205ENST00000587163 FLT3LGP49771 235 aa20.28■□□□□ 0.84
NPC1-205ENST00000587163 PICALMQ13492 652 aa20.28■□□□□ 0.84
NPC1-205ENST00000587163 MEIS3Q99687 375 aa20.28■□□□□ 0.84
NPC1-205ENST00000587163 PTPRFP10586 1907 aa20.27■□□□□ 0.84
NPC1-205ENST00000587163 RANBP2P49792 3224 aaKnown RBP20.27■□□□□ 0.84
NPC1-205ENST00000587163 TRIM75PA6NK02 468 aa20.27■□□□□ 0.84
NPC1-205ENST00000587163 BTDP43251 543 aa20.27■□□□□ 0.84
NPC1-205ENST00000587163 ZNF384Q8TF68 577 aa20.27■□□□□ 0.84
NPC1-205ENST00000587163 SLC45A1Q9Y2W3 748 aa20.27■□□□□ 0.84
NPC1-205ENST00000587163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.27■□□□□ 0.84
NPC1-205ENST00000587163 SGPL1O95470 568 aa20.26■□□□□ 0.83
NPC1-205ENST00000587163 RHBDL3P58872 404 aa20.26■□□□□ 0.83
NPC1-205ENST00000587163 XAGE2Q96GT9 111 aa20.26■□□□□ 0.83
NPC1-205ENST00000587163 HTATIP2Q9BUP3 242 aa20.26■□□□□ 0.83
NPC1-205ENST00000587163 DOCK1Q14185 1865 aa20.26■□□□□ 0.83
NPC1-205ENST00000587163 MROH7-TTC4A0A0A0MT08 1334 aa20.26■□□□□ 0.83
NPC1-205ENST00000587163 PDS5AQ29RF7 1337 aaKnown RBP20.26■□□□□ 0.83
NPC1-205ENST00000587163 GPR75-ASB3A0A0A6YYF3 556 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 A0A1B0GUL7 405 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 FAM196BA6NMK8 535 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 FARP2O94887 1054 aaPredicted RBP20.25■□□□□ 0.83
NPC1-205ENST00000587163 INHAP05111 366 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 MECOMQ03112 1051 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 TFCP2Q12800 502 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 SLF2Q8IX21 1173 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 PRO3102Q9H379 93 aa20.25■□□□□ 0.83
NPC1-205ENST00000587163 TNPO2O14787 897 aaKnown RBP20.24■□□□□ 0.83
NPC1-205ENST00000587163 TREML2Q5T2D2 321 aa20.24■□□□□ 0.83
NPC1-205ENST00000587163 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
NPC1-205ENST00000587163 ANKRD13CQ8N6S4 541 aa20.24■□□□□ 0.83
NPC1-205ENST00000587163 PXYLP1Q8TE99 480 aa20.24■□□□□ 0.83
NPC1-205ENST00000587163 SMCR8Q8TEV9 937 aaPredicted RBP20.24■□□□□ 0.83
NPC1-205ENST00000587163 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
NPC1-205ENST00000587163 AGTPBP1Q9UPW5 1226 aa20.24■□□□□ 0.83
NPC1-205ENST00000587163 HDAC5Q9UQL6 1122 aa20.24■□□□□ 0.83
NPC1-205ENST00000587163 ZBTB7BO15156 539 aaPredicted RBP20.23■□□□□ 0.83
NPC1-205ENST00000587163 IRF5Q13568 498 aa20.23■□□□□ 0.83
NPC1-205ENST00000587163 ERICH6Q7L0X2 663 aa20.23■□□□□ 0.83
NPC1-205ENST00000587163 TBC1D12O60347 775 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 TFRCP02786 760 aaKnown RBP20.22■□□□□ 0.83
NPC1-205ENST00000587163 PI16Q6UXB8 463 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 TBC1D9Q6ZT07 1266 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 DEFB118Q96PH6 123 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
NPC1-205ENST00000587163 HMG20BQ9P0W2 317 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 AKAP2Q9Y2D5 859 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 NR2E3Q9Y5X4 410 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 DOCK3Q8IZD9 2030 aa20.22■□□□□ 0.83
NPC1-205ENST00000587163 SRGAP3O43295 1099 aa20.21■□□□□ 0.83
NPC1-205ENST00000587163 SPP2Q13103 211 aa20.21■□□□□ 0.83
NPC1-205ENST00000587163 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
NPC1-205ENST00000587163 NEUROD6Q96NK8 337 aa20.21■□□□□ 0.83
NPC1-205ENST00000587163 PAK6Q9NQU5 681 aaPredicted RBP20.21■□□□□ 0.83
NPC1-205ENST00000587163 TAOK2Q9UL54 1235 aa20.21■□□□□ 0.83
NPC1-205ENST00000587163 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
NPC1-205ENST00000587163 CT47B1P0C2W7 299 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms