RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 SH3BP5LQ7L8J4 393 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 PRRT2Q7Z6L0 340 aaPredicted RBP9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 DZIP1Q86YF9 867 aaKnown RBP9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 RAET1EQ8TD07 263 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 MEIS3Q99687 375 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 PICK1Q9NRD5 415 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 SLC45A1Q9Y2W3 748 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 AFG3L2Q9Y4W6 797 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 ZHX2Q9Y6X8 837 aa9.95□□□□□ -0.82
CAPNS1-203ENST00000586963 RFX7Q2KHR2 1363 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 MYPNQ86TC9 1320 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 GPR75-ASB3A0A0A6YYF3 556 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 A0A1B0GUL7 405 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 DDTLA6NHG4 134 aaPredicted RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 TBC1D12O60347 775 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 CTNND1O60716 968 aaKnown RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 MAP4K4O95819 1239 aaPredicted RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 MYCP01106 439 aaPredicted RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 GJB1P08034 283 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 CYP2C8P10632 490 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 FCGRTP55899 365 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 MTFR1Q15390 333 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 ZSCAN29Q8IWY8 852 aaPredicted RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 DDX4Q9NQI0 724 aaKnown RBP9.94□□□□□ -0.82
CAPNS1-203ENST00000586963 MROH7-TTC4A0A0A0MT08 1334 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 SRGAP3O43295 1099 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 CAPN2P17655 700 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 BTDP43251 543 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 GJA8P48165 433 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 RHBDL3P58872 404 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 UBXN2AP68543 259 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 MECOMQ03112 1051 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 TFCP2Q12800 502 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 ERICH6Q7L0X2 663 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 SHISA4Q96DD7 197 aa9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
CAPNS1-203ENST00000586963 H0YGN5 161 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 LDHCP07864 332 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 CCL5P13501 91 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 GSTO1P78417 241 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 PRKCZQ05513 592 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 GADL1Q6ZQY3 521 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 UBE2Q1Q7Z7E8 422 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 ZNF384Q8TF68 577 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 RNF208Q9H0X6 261 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 HMG20BQ9P0W2 317 aa9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 BIN2Q9UBW5 565 aaPredicted RBP9.92□□□□□ -0.82
CAPNS1-203ENST00000586963 IPO8O15397 1037 aaKnown RBP9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 PICALMQ13492 652 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 IRF5Q13568 498 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 SPATA5Q8NB90 893 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 PXYLP1Q8TE99 480 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 NSUN4Q96CB9 384 aaKnown RBP9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 NEUROD6Q96NK8 337 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 HTATIP2Q9BUP3 242 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 TBC1D2Q9BYX2 928 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 OSBPL5Q9H0X9 879 aaPredicted RBP9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 AGTPBP1Q9UPW5 1226 aa9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 RANBP2P49792 3224 aaKnown RBP9.91□□□□□ -0.82
CAPNS1-203ENST00000586963 MYH13Q9UKX3 1938 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 TRIM75PA6NK02 468 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 CCER2I3L3R5 266 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 ADCY3O60266 1144 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 SGPL1O95470 568 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 GNAI2P04899 355 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 SLURP2P0DP57 97 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 ARID4AP29374 1257 aaPredicted RBP9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 FLT3LGP49771 235 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 G3BP1Q13283 466 aaKnown RBP eCLIP9.9□□□□□ -0.821e-8■■■■■ 40.6
CAPNS1-203ENST00000586963 GORABQ5T7V8 394 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 PROCA1Q8NCQ7 364 aaPredicted RBP9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 SMCR8Q8TEV9 937 aaPredicted RBP9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 DPF3Q92784 378 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 ZSWIM8A7E2V4 1837 aa9.9□□□□□ -0.82
CAPNS1-203ENST00000586963 CEP290O15078 2479 aa9.9□□□□□ -0.83
CAPNS1-203ENST00000586963 AK9Q5TCS8 1911 aa9.9□□□□□ -0.83
CAPNS1-203ENST00000586963 TNPO2O14787 897 aaKnown RBP9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 IGSF3O75054 1194 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 UQCRFS1P1P0C7P4 283 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 TRIM27P14373 513 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 CAP2P40123 477 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 FAM110CQ1W6H9 321 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 PI16Q6UXB8 463 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 ATF7IPQ6VMQ6 1270 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 ZNF280CQ8ND82 737 aa9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
CAPNS1-203ENST00000586963 COA7Q96BR5 231 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms