RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 STK32BQ9NY57 414 aa26.1■■□□□ 1.77
CIRBP-208ENST00000586548 CPLX1O14810 134 aa26.09■■□□□ 1.77
CIRBP-208ENST00000586548 FIBPO43427 364 aa26.09■■□□□ 1.77
CIRBP-208ENST00000586548 METAP2P50579 478 aaKnown RBP eCLIP26.09■■□□□ 1.77
CIRBP-208ENST00000586548 EN1Q05925 392 aaPredicted RBP26.09■■□□□ 1.77
CIRBP-208ENST00000586548 RESTQ13127 1097 aa26.09■■□□□ 1.77
CIRBP-208ENST00000586548 NFXL1Q6ZNB6 911 aa26.09■■□□□ 1.77
CIRBP-208ENST00000586548 DCP1AQ9NPI6 582 aaPredicted RBP26.09■■□□□ 1.77
CIRBP-208ENST00000586548 FGRP09769 529 aa26.08■■□□□ 1.77
CIRBP-208ENST00000586548 FDPSP14324 419 aaKnown RBP26.08■■□□□ 1.77
CIRBP-208ENST00000586548 ESR2Q92731 530 aa26.08■■□□□ 1.77
CIRBP-208ENST00000586548 NID2Q14112 1375 aa26.08■■□□□ 1.77
CIRBP-208ENST00000586548 MYH2Q9UKX2 1941 aa26.08■■□□□ 1.77
CIRBP-208ENST00000586548 ZBTB43O43298 467 aa26.08■■□□□ 1.76
CIRBP-208ENST00000586548 GADD45BO75293 160 aaPredicted RBP26.08■■□□□ 1.76
CIRBP-208ENST00000586548 UBE2HP62256 183 aa26.08■■□□□ 1.76
CIRBP-208ENST00000586548 SBK1Q52WX2 424 aa26.08■■□□□ 1.76
CIRBP-208ENST00000586548 TBC1D22AQ8WUA7 517 aa26.08■■□□□ 1.76
CIRBP-208ENST00000586548 SENP2Q9HC62 589 aa26.08■■□□□ 1.76
CIRBP-208ENST00000586548 ARPP21Q9UBL0 812 aaPredicted RBP26.08■■□□□ 1.76
CIRBP-208ENST00000586548 ERICH2A1L162 156 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 CCDC69A6NI79 296 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 USP17L12C9JPN9 530 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 USP17L21D6R901 530 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 PPP4CP60510 307 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 CERS3Q8IU89 383 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 TMTC2Q8N394 836 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 FAM205AQ6ZU69 1335 aa26.07■■□□□ 1.76
CIRBP-208ENST00000586548 MYH15Q9Y2K3 1946 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 CDKL5O76039 1030 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 BAG3O95817 575 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 ZNF445P59923 1031 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 WTAPQ15007 396 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 GRIK5Q16478 980 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 ZSCAN23Q3MJ62 389 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 RAB11FIP4Q86YS3 637 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 MPNDQ8N594 471 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 NOL10Q9BSC4 688 aaKnown RBP26.06■■□□□ 1.76
CIRBP-208ENST00000586548 MROH7-TTC4A0A0A0MT08 1334 aa26.06■■□□□ 1.76
CIRBP-208ENST00000586548 CPLX2Q6PUV4 134 aaKnown RBP26.05■■□□□ 1.76
CIRBP-208ENST00000586548 RGS22Q8NE09 1264 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 COA1Q9GZY4 146 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 TMEM63CQ9P1W3 806 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 ORC3Q9UBD5 711 aaPredicted RBP26.05■■□□□ 1.76
CIRBP-208ENST00000586548 SLC12A7Q9Y666 1083 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 CYP2D7A0A087X1C5 515 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 GOLGA8AA7E2F4 631 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 RCAN1P53805 252 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 SYNE3Q6ZMZ3 975 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 MICU3Q86XE3 530 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 STK11IPQ8N1F8 1099 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 SYAP1Q96A49 352 aaPredicted RBP26.05■■□□□ 1.76
CIRBP-208ENST00000586548 UBAC1Q9BSL1 405 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 TMX4Q9H1E5 349 aaPredicted RBP26.05■■□□□ 1.76
CIRBP-208ENST00000586548 RBM27Q9P2N5 1060 aaKnown RBP26.05■■□□□ 1.76
CIRBP-208ENST00000586548 ELP1O95163 1332 aa26.05■■□□□ 1.76
CIRBP-208ENST00000586548 DIXDC1Q155Q3 683 aa26.04■■□□□ 1.76
CIRBP-208ENST00000586548 STYK1Q6J9G0 422 aa26.04■■□□□ 1.76
CIRBP-208ENST00000586548 SCAND2PQ9GZW5 306 aaPredicted RBP26.04■■□□□ 1.76
CIRBP-208ENST00000586548 ORC4O43929 436 aa26.03■■□□□ 1.76
CIRBP-208ENST00000586548 SLC3A2P08195 630 aaKnown RBP26.03■■□□□ 1.76
CIRBP-208ENST00000586548 MFSD14BQ5SR56 506 aa26.03■■□□□ 1.76
CIRBP-208ENST00000586548 FAM173BQ6P4H8 233 aa26.03■■□□□ 1.76
CIRBP-208ENST00000586548 DPP8Q6V1X1 898 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-208ENST00000586548 C2CD5Q86YS7 1000 aa26.03■■□□□ 1.76
CIRBP-208ENST00000586548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.03■■□□□ 1.76
CIRBP-208ENST00000586548 DLEC1Q9Y238 1755 aa26.03■■□□□ 1.76
CIRBP-208ENST00000586548 NAV1Q8NEY1 1877 aa26.03■■□□□ 1.76
CIRBP-208ENST00000586548 ILDR2Q71H61 639 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 ZKSCAN3Q9BRR0 538 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 RTFDC1Q9BY42 306 aaPredicted RBP26.02■■□□□ 1.76
CIRBP-208ENST00000586548 H0YIN7 160 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 SMIM22K7EJ46 135 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 ADD1P35611 737 aaKnown RBP26.02■■□□□ 1.76
CIRBP-208ENST00000586548 MRE11P49959 708 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 FOSBP53539 338 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 SLF2Q8IX21 1173 aa26.02■■□□□ 1.76
CIRBP-208ENST00000586548 ZC3H12CQ9C0D7 883 aaKnown RBP26.02■■□□□ 1.76
CIRBP-208ENST00000586548 MKRN1Q9UHC7 482 aaKnown RBP26.02■■□□□ 1.76
CIRBP-208ENST00000586548 PPFIA3O75145 1194 aa26.01■■□□□ 1.75
CIRBP-208ENST00000586548 CDC27P30260 824 aa26.01■■□□□ 1.75
CIRBP-208ENST00000586548 SEC23AQ15436 765 aa26.01■■□□□ 1.75
CIRBP-208ENST00000586548 GAS2L3Q86XJ1 694 aa26.01■■□□□ 1.75
CIRBP-208ENST00000586548 SH3RF3Q8TEJ3 882 aaPredicted RBP26.01■■□□□ 1.75
CIRBP-208ENST00000586548 ZNF622Q969S3 477 aaKnown RBP eCLIP26.01■■□□□ 1.75
CIRBP-208ENST00000586548 FAM163AQ96GL9 167 aaPredicted RBP26.01■■□□□ 1.75
CIRBP-208ENST00000586548 C8orf76Q96K31 380 aa26.01■■□□□ 1.75
CIRBP-208ENST00000586548 TNKSO95271 1327 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 RIMBP2O15034 1052 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 RXRAP19793 462 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 USP5P45974 858 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 NT5C2P49902 561 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 TTC6Q86TZ1 520 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 FAM217BQ9NTX9 383 aaPredicted RBP26■■□□□ 1.75
CIRBP-208ENST00000586548 CDK5RAP2Q96SN8 1893 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 GPR75-ASB3A0A0A6YYF3 556 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 SF3B2Q13435 895 aaKnown RBP26■■□□□ 1.75
CIRBP-208ENST00000586548 NTRK3Q16288 839 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 OLFM4Q6UX06 510 aa26■■□□□ 1.75
CIRBP-208ENST00000586548 ZSCAN10Q96SZ4 725 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms