RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 PTPN18Q99952 460 aa13.8□□□□□ -0.2
ACTN4-209ENST00000586538 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
ACTN4-209ENST00000586538 FAM198AQ9UFP1 575 aa13.8□□□□□ -0.2
ACTN4-209ENST00000586538 FPGT-TNNI3KV9GXZ4 949 aa13.8□□□□□ -0.2
ACTN4-209ENST00000586538 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
ACTN4-209ENST00000586538 OTOP1Q7RTM1 612 aa13.79□□□□□ -0.2
ACTN4-209ENST00000586538 ZNF512BQ96KM6 892 aaPredicted RBP13.79□□□□□ -0.2
ACTN4-209ENST00000586538 KCNH4Q9UQ05 1017 aa13.79□□□□□ -0.2
ACTN4-209ENST00000586538 TNNQ9UQP3 1299 aa13.79□□□□□ -0.2
ACTN4-209ENST00000586538 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
ACTN4-209ENST00000586538 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
ACTN4-209ENST00000586538 MAST2Q6P0Q8 1798 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 CXCL11O14625 94 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
ACTN4-209ENST00000586538 TLR2O60603 784 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 HMMRO75330 724 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 SOX10P56693 466 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 PICALMQ13492 652 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 FASTKD5Q7L8L6 764 aaKnown RBP13.78□□□□□ -0.2
ACTN4-209ENST00000586538 ANKRD23Q86SG2 305 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 CNKSR2Q8WXI2 1034 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 NSUN4Q96CB9 384 aaKnown RBP13.78□□□□□ -0.2
ACTN4-209ENST00000586538 TBC1D2Q9BYX2 928 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 R3HDMLQ9H3Y0 253 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 ATRNL1Q5VV63 1379 aa13.78□□□□□ -0.2
ACTN4-209ENST00000586538 TBC1D12O60347 775 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 CTNND1O60716 968 aaKnown RBP13.77□□□□□ -0.21
ACTN4-209ENST00000586538 INPP5BP32019 993 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 MCAMP43121 646 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 PRMT2P55345 433 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 NAA16Q6N069 864 aaPredicted RBP13.77□□□□□ -0.21
ACTN4-209ENST00000586538 FAM43AQ8N2R8 423 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.77□□□□□ -0.21
ACTN4-209ENST00000586538 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
ACTN4-209ENST00000586538 DHX36Q9H2U1 1008 aaKnown RBP13.77□□□□□ -0.21
ACTN4-209ENST00000586538 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
ACTN4-209ENST00000586538 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
ACTN4-209ENST00000586538 HOXD10P28358 340 aa13.76□□□□□ -0.21
ACTN4-209ENST00000586538 MAP3K10Q02779 954 aa13.76□□□□□ -0.21
ACTN4-209ENST00000586538 OSBPL5Q9H0X9 879 aaPredicted RBP13.76□□□□□ -0.21
ACTN4-209ENST00000586538 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
ACTN4-209ENST00000586538 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
ACTN4-209ENST00000586538 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
ACTN4-209ENST00000586538 TEX11Q8IYF3 940 aa13.75□□□□□ -0.21
ACTN4-209ENST00000586538 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
ACTN4-209ENST00000586538 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
ACTN4-209ENST00000586538 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
ACTN4-209ENST00000586538 DOCK1Q14185 1865 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 PDHXO00330 501 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 RLBP1P12271 317 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 PTPRAP18433 802 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 RHBDL3P58872 404 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 LACTBP83111 547 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-209ENST00000586538 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 DBNDD2Q9BQY9 259 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.212e-7■■□□□ 13.9
ACTN4-209ENST00000586538 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
ACTN4-209ENST00000586538 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-209ENST00000586538 PHF20L1A8MW92 1017 aa13.73□□□□□ -0.21
ACTN4-209ENST00000586538 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-209ENST00000586538 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
ACTN4-209ENST00000586538 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
ACTN4-209ENST00000586538 AS3MTQ9HBK9 375 aa13.73□□□□□ -0.21
ACTN4-209ENST00000586538 DDX4Q9NQI0 724 aaKnown RBP13.73□□□□□ -0.21
ACTN4-209ENST00000586538 PI4KBQ9UBF8 816 aa13.73□□□□□ -0.21
ACTN4-209ENST00000586538 PNMA3Q9UL41 463 aa13.73□□□□□ -0.21
ACTN4-209ENST00000586538 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 HLA-DOAP06340 250 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 PPP4CP60510 307 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 MAP3K12Q12852 859 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 PABPC4Q13310 644 aaKnown RBP eCLIP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 PRRT2Q7Z6L0 340 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 CLASRPQ8N2M8 674 aaKnown RBP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 ARMC5Q96C12 935 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 KIF1BPQ96EK5 621 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 GINM1Q9NU53 330 aa13.72□□□□□ -0.21
ACTN4-209ENST00000586538 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 DBNLQ9UJU6 430 aaKnown RBP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-209ENST00000586538 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-209ENST00000586538 C17orf99Q6UX52 265 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 SH3BP5LQ7L8J4 393 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 AACSQ86V21 672 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 PROCA1Q8NCQ7 364 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-209ENST00000586538 PANK1Q8TE04 598 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 SMCR8Q8TEV9 937 aaPredicted RBP13.71□□□□□ -0.21
ACTN4-209ENST00000586538 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 RCAN3Q9UKA8 241 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
ACTN4-209ENST00000586538 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.22
ACTN4-209ENST00000586538 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
ACTN4-209ENST00000586538 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
ACTN4-209ENST00000586538 ASNSP08243 561 aa13.7□□□□□ -0.22
ACTN4-209ENST00000586538 ZAP70P43403 619 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms