RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 LSG1Q9H089 658 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-203ENST00000586486 EPB41L4AQ9HCS5 686 aaPredicted RBP20.3■□□□□ 0.84
PRKCSH-203ENST00000586486 DDX4Q9NQI0 724 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-203ENST00000586486 FAM198AQ9UFP1 575 aa20.3■□□□□ 0.84
PRKCSH-203ENST00000586486 LAMA4Q16363 1823 aa20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 CNTNAP1P78357 1384 aa20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 EPB41L2O43491 1005 aaKnown RBP20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 ALX1Q15699 326 aa20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 VEZTQ9HBM0 779 aa20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 ANO2Q9NQ90 1003 aa20.29■□□□□ 0.84
PRKCSH-203ENST00000586486 ATRNL1Q5VV63 1379 aa20.28■□□□□ 0.84
PRKCSH-203ENST00000586486 MAPKAPK5Q8IW41 473 aa20.28■□□□□ 0.84
PRKCSH-203ENST00000586486 IFNL3Q8IZI9 196 aa20.28■□□□□ 0.84
PRKCSH-203ENST00000586486 OSBPL5Q9H0X9 879 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-203ENST00000586486 GPBP1L1Q9HC44 474 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-203ENST00000586486 APPP05067 770 aa20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 TNNI2P48788 182 aa20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 PTH1RQ03431 593 aa20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 PICALMQ13492 652 aa20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 EAPPQ56P03 285 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 FAM151AQ8WW52 585 aa20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 MAP4K1Q92918 833 aa20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 POLR2AP24928 1970 aaKnown RBP20.27■□□□□ 0.84
PRKCSH-203ENST00000586486 TCP10L2B9ZVM9 353 aa20.27■□□□□ 0.83
PRKCSH-203ENST00000586486 NAPBQ9H115 298 aa20.27■□□□□ 0.83
PRKCSH-203ENST00000586486 ARPP21Q9UBL0 812 aaPredicted RBP20.27■□□□□ 0.83
PRKCSH-203ENST00000586486 PPP2R3BQ9Y5P8 575 aa20.27■□□□□ 0.83
PRKCSH-203ENST00000586486 YY1P25490 414 aa20.26■□□□□ 0.83
PRKCSH-203ENST00000586486 TDO2P48775 406 aa20.26■□□□□ 0.83
PRKCSH-203ENST00000586486 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
PRKCSH-203ENST00000586486 DCPSQ96C86 337 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-203ENST00000586486 FGAP02671 866 aa20.25■□□□□ 0.83
PRKCSH-203ENST00000586486 SBK1Q52WX2 424 aa20.25■□□□□ 0.83
PRKCSH-203ENST00000586486 BACH2Q9BYV9 841 aa20.25■□□□□ 0.83
PRKCSH-203ENST00000586486 DHX36Q9H2U1 1008 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-203ENST00000586486 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
PRKCSH-203ENST00000586486 SIPA1L1O43166 1804 aa20.25■□□□□ 0.83
PRKCSH-203ENST00000586486 TCP10Q12799 353 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 RASA3Q14644 834 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 SEC24BO95487 1268 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 POTEJP0CG39 1038 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 SULF1Q8IWU6 871 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 ZFPM1Q8IX07 1006 aa20.24■□□□□ 0.83
PRKCSH-203ENST00000586486 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 USP17L21D6R901 530 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 SH3BP5LQ7L8J4 393 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 AMOTL1Q8IY63 956 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 TEPSINQ96N21 525 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 TMEM39BQ9GZU3 492 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 SAP30BPQ9UHR5 308 aaKnown RBP20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 RBM8AQ9Y5S9 174 aaKnown RBP20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 ROBO3Q96MS0 1386 aa20.23■□□□□ 0.83
PRKCSH-203ENST00000586486 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
PRKCSH-203ENST00000586486 KRT26Q7Z3Y9 468 aa20.22■□□□□ 0.83
PRKCSH-203ENST00000586486 TTC6Q86TZ1 520 aa20.22■□□□□ 0.83
PRKCSH-203ENST00000586486 USP26Q9BXU7 913 aa20.22■□□□□ 0.83
PRKCSH-203ENST00000586486 TAOK2Q9UL54 1235 aa20.22■□□□□ 0.83
PRKCSH-203ENST00000586486 PALD1Q9ULE6 856 aa20.22■□□□□ 0.83
PRKCSH-203ENST00000586486 DDTLA6NHG4 134 aaPredicted RBP20.21■□□□□ 0.83
PRKCSH-203ENST00000586486 KIF3CO14782 793 aa20.21■□□□□ 0.83
PRKCSH-203ENST00000586486 ANAPC4Q9UJX5 808 aa20.21■□□□□ 0.83
PRKCSH-203ENST00000586486 CLEC11AQ9Y240 323 aa20.21■□□□□ 0.83
PRKCSH-203ENST00000586486 POLR3DP05423 398 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 HLA-DOAP06340 250 aa20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 NECTIN1Q15223 517 aa20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 ZSCAN29Q8IWY8 852 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 EHD4Q9H223 541 aa20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 SCAF8Q9UPN6 1271 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 IMMTQ16891 758 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 ZNF784Q8NCA9 323 aaPredicted RBP20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 CSRNP1Q96S65 589 aa20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 PI4KBQ9UBF8 816 aa20.2■□□□□ 0.82
PRKCSH-203ENST00000586486 ADM5C9JUS6 153 aa20.19■□□□□ 0.82
PRKCSH-203ENST00000586486 CYP2D6P10635 497 aa20.19■□□□□ 0.82
PRKCSH-203ENST00000586486 HSPA4P34932 840 aa20.19■□□□□ 0.82
PRKCSH-203ENST00000586486 PLCD1P51178 756 aa20.19■□□□□ 0.82
PRKCSH-203ENST00000586486 PPARAQ07869 468 aa20.19■□□□□ 0.82
PRKCSH-203ENST00000586486 METTL16Q86W50 562 aaKnown RBP20.19■□□□□ 0.82
PRKCSH-203ENST00000586486 CYP2D7A0A087X1C5 515 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 MINDY4BA8MYZ0 360 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 ZNF213O14771 459 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 CYP21A2P08686 494 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 MAP1SQ66K74 1059 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 CDAN1Q8IWY9 1227 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 HOOK2Q96ED9 719 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 SERPINB13Q9UIV8 391 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
PRKCSH-203ENST00000586486 MYH8P13535 1937 aa20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 GABPAQ06546 454 aa20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 RNF20Q5VTR2 975 aa20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 KCNB2Q92953 911 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms