RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 BRF1Q92994 677 aa24.15■■□□□ 1.46
ATG4D-204ENST00000586417 DYNLL1P63167 89 aaKnown RBP24.14■■□□□ 1.46
ATG4D-204ENST00000586417 NCOA7Q8NI08 942 aa24.14■■□□□ 1.46
ATG4D-204ENST00000586417 BRD1O95696 1058 aa24.14■■□□□ 1.45
ATG4D-204ENST00000586417 CHST3Q7LGC8 479 aa24.14■■□□□ 1.45
ATG4D-204ENST00000586417 NACAP1Q9BZK3 213 aa24.14■■□□□ 1.45
ATG4D-204ENST00000586417 PCDHAC2Q9Y5I4 1007 aa24.14■■□□□ 1.45
ATG4D-204ENST00000586417 SHTN1A0MZ66 631 aa24.13■■□□□ 1.45
ATG4D-204ENST00000586417 ANTXR2P58335 489 aa24.13■■□□□ 1.45
ATG4D-204ENST00000586417 SMC3Q9UQE7 1217 aa24.13■■□□□ 1.45
ATG4D-204ENST00000586417 WDR19Q8NEZ3 1342 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 MYO3BQ8WXR4 1341 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 MCM5P33992 734 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 AGBL3Q8NEM8 1001 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 NKX2-3Q8TAU0 364 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 SDR42E1Q8WUS8 393 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 GBP4Q96PP9 640 aa24.12■■□□□ 1.45
ATG4D-204ENST00000586417 TDO2P48775 406 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 GMPSP49915 693 aaPredicted RBP24.11■■□□□ 1.45
ATG4D-204ENST00000586417 GSTO1P78417 241 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 FGD1P98174 961 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 RALYLQ86SE5 291 aaKnown RBP24.11■■□□□ 1.45
ATG4D-204ENST00000586417 GTF3C6Q969F1 213 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 TACC3Q9Y6A5 838 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 MROH7-TTC4A0A0A0MT08 1334 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 PRC1O43663 620 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 AATFQ9NY61 560 aaKnown RBP eCLIP24.11■■□□□ 1.45
ATG4D-204ENST00000586417 DAGLAQ9Y4D2 1042 aa24.11■■□□□ 1.45
ATG4D-204ENST00000586417 NEDD4P46934 1319 aa24.1■■□□□ 1.45
ATG4D-204ENST00000586417 DDNO94850 711 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-204ENST00000586417 GJB2P29033 226 aa24.1■■□□□ 1.45
ATG4D-204ENST00000586417 CRKP46108 304 aa24.1■■□□□ 1.45
ATG4D-204ENST00000586417 APOBRQ0VD83 1088 aa24.1■■□□□ 1.45
ATG4D-204ENST00000586417 STK3Q13188 491 aa24.1■■□□□ 1.45
ATG4D-204ENST00000586417 FAM163AQ96GL9 167 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-204ENST00000586417 GAKO14976 1311 aa24.1■■□□□ 1.45
ATG4D-204ENST00000586417 USP17L8P0C7I0 530 aa24.09■■□□□ 1.45
ATG4D-204ENST00000586417 EVCP57679 992 aa24.09■■□□□ 1.45
ATG4D-204ENST00000586417 CTDSPL2Q05D32 466 aa24.09■■□□□ 1.45
ATG4D-204ENST00000586417 GPC2Q8N158 579 aa24.09■■□□□ 1.45
ATG4D-204ENST00000586417 GPHNQ9NQX3 736 aaPredicted RBP24.09■■□□□ 1.45
ATG4D-204ENST00000586417 PFKFB2O60825 505 aa24.08■■□□□ 1.45
ATG4D-204ENST00000586417 BAG4O95429 457 aaKnown RBP24.08■■□□□ 1.45
ATG4D-204ENST00000586417 LDHCP07864 332 aa24.08■■□□□ 1.45
ATG4D-204ENST00000586417 TRDNQ13061 729 aa24.08■■□□□ 1.45
ATG4D-204ENST00000586417 TEKT1Q969V4 418 aa24.08■■□□□ 1.45
ATG4D-204ENST00000586417 DTNBO60941 627 aa24.08■■□□□ 1.44
ATG4D-204ENST00000586417 BTDP43251 543 aa24.08■■□□□ 1.44
ATG4D-204ENST00000586417 HHIPL2Q6UWX4 724 aa24.08■■□□□ 1.44
ATG4D-204ENST00000586417 CYB5R4Q7L1T6 521 aa24.08■■□□□ 1.44
ATG4D-204ENST00000586417 GPR75-ASB3A0A0A6YYF3 556 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 DDX11L8A8MPP1 907 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 RPS12P25398 132 aaKnown RBP24.07■■□□□ 1.44
ATG4D-204ENST00000586417 RBM5P52756 815 aaKnown RBP eCLIP24.07■■□□□ 1.44
ATG4D-204ENST00000586417 AKNAD1Q5T1N1 836 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 APOBEC3HQ6NTF7 200 aaKnown RBP24.07■■□□□ 1.44
ATG4D-204ENST00000586417 GIMAP6Q6P9H5 292 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 SLF2Q8IX21 1173 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 STAG1Q8WVM7 1258 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 ZNF274Q96GC6 653 aaPredicted RBP24.07■■□□□ 1.44
ATG4D-204ENST00000586417 INCENPQ9NQS7 918 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 ANAPC4Q9UJX5 808 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 SERPINA10Q9UK55 444 aa24.07■■□□□ 1.44
ATG4D-204ENST00000586417 BAZ2AQ9UIF9 1905 aaKnown RBP24.06■■□□□ 1.44
ATG4D-204ENST00000586417 B4E1Z4 1266 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 SYT1P21579 422 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 HDLBPQ00341 1268 aaKnown RBP24.06■■□□□ 1.44
ATG4D-204ENST00000586417 SCRN1Q12765 414 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 OGFOD1Q8N543 542 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 MRIQ9BWK5 157 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 PPARAQ07869 468 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 CFAP100Q494V2 611 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 MICALL2Q8IY33 904 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 SH3RF3Q8TEJ3 882 aaPredicted RBP24.06■■□□□ 1.44
ATG4D-204ENST00000586417 DPF2Q92785 391 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 ZDHHC15Q96MV8 337 aa24.06■■□□□ 1.44
ATG4D-204ENST00000586417 CNOT7Q9UIV1 285 aaKnown RBP24.06■■□□□ 1.44
ATG4D-204ENST00000586417 WDR33Q9C0J8 1336 aaKnown RBP24.05■■□□□ 1.44
ATG4D-204ENST00000586417 DCAF8L1A6NGE4 600 aa24.05■■□□□ 1.44
ATG4D-204ENST00000586417 EGFRP00533 1210 aa24.05■■□□□ 1.44
ATG4D-204ENST00000586417 PDIA3P30101 505 aaKnown RBP24.05■■□□□ 1.44
ATG4D-204ENST00000586417 PPP4CP60510 307 aa24.05■■□□□ 1.44
ATG4D-204ENST00000586417 CRNKL1Q9BZJ0 848 aaKnown RBP24.05■■□□□ 1.44
ATG4D-204ENST00000586417 HDAC9Q9UKV0 1011 aa24.05■■□□□ 1.44
ATG4D-204ENST00000586417 CDK5RAP2Q96SN8 1893 aa24.05■■□□□ 1.44
ATG4D-204ENST00000586417 FOXD4L5Q5VV16 416 aaPredicted RBP24.04■■□□□ 1.44
ATG4D-204ENST00000586417 FOXD4L4Q8WXT5 416 aaPredicted RBP24.04■■□□□ 1.44
ATG4D-204ENST00000586417 PRMT6Q96LA8 375 aaPredicted RBP24.04■■□□□ 1.44
ATG4D-204ENST00000586417 CNNM2Q9H8M5 875 aa24.04■■□□□ 1.44
ATG4D-204ENST00000586417 STX6O43752 255 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 RHBDL3P58872 404 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 ZNF280AP59817 542 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-204ENST00000586417 MFSD6Q6ZSS7 791 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 DCP1AQ9NPI6 582 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-204ENST00000586417 BRPF3Q9ULD4 1205 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 SMIM22K7EJ46 135 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 SH2B2O14492 632 aaPredicted RBP24.03■■□□□ 1.44
ATG4D-204ENST00000586417 BAG3O95817 575 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 SAMD7Q7Z3H4 446 aa24.03■■□□□ 1.44
ATG4D-204ENST00000586417 NOL10Q9BSC4 688 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms