RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 DHX8Q14562 1220 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 KCNB2Q92953 911 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 PGBD1Q96JS3 809 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 BSDC1Q9NW68 430 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 NOL7Q9UMY1 257 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 CYP2D6P10635 497 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 ANTXR2P58335 489 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 VPS72Q15906 364 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 STX1AQ16623 288 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 CCDC186Q7Z3E2 898 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 CBX8Q9HC52 389 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 CLIP2Q9UDT6 1046 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 APBA3O96018 575 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 FAM84BQ96KN1 310 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 CLIC6Q96NY7 704 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 CTDNEP1O95476 244 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 SERPINB2P05120 415 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 CLCN1P35523 988 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 AFMP43652 599 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 GGA1Q9UJY5 639 aa14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMARCA4-208ENST00000585799 ARID4AP29374 1257 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 CDC27P30260 824 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 MECOMQ03112 1051 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 FAM160A1Q05DH4 1040 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 NFIXQ14938 502 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 UVSSAQ2YD98 709 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 TEX11Q8IYF3 940 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 UBE2Q2LH0YL09 131 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 CTAGE5O15320 804 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 GTF2IP78347 998 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 BARGINQ6ZT62 677 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 TFAP4Q01664 338 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 LMO7Q8WWI1 1683 aa14.35□□□□□ -0.11
SMARCA4-208ENST00000585799 ZMYM6O95789 1325 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 USP17L8P0C7I0 530 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 LMOD1P29536 600 aaPredicted RBP14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 ZKSCAN5Q9Y2L8 839 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 LRRC37A3O60309 1634 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 PTGS1P23219 599 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 ZNF174Q15697 407 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 DYNLL2Q96FJ2 89 aa14.34□□□□□ -0.11
SMARCA4-208ENST00000585799 CFAP100Q494V2 611 aa14.33□□□□□ -0.11
SMARCA4-208ENST00000585799 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.11
SMARCA4-208ENST00000585799 RFX7Q2KHR2 1363 aa14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 NMT2O60551 498 aa14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 NR5A1Q13285 461 aa14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 SOGA3Q5TF21 947 aa14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 CRACR2BQ8N4Y2 399 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 RBM17Q96I25 401 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 NDUFA8P51970 172 aa14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 TRMT1Q9NXH9 659 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 JCADQ9P266 1359 aa14.33□□□□□ -0.12
SMARCA4-208ENST00000585799 DHX58Q96C10 678 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 ZNF202O95125 648 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 CCDC96Q2M329 555 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 TXNRD3Q86VQ6 643 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 SMARCC2Q8TAQ2 1214 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 WDR66Q8TBY9 1149 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 PPP1R9BQ96SB3 815 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 TNS2Q63HR2 1409 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 CCDC194A0A1B0GVG4 234 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 FDPSP14324 419 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 SCNN1DP51172 638 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 GSTO1P78417 241 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 KRT27Q7Z3Y8 459 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 STAMQ92783 540 aa14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 ZSCAN10Q96SZ4 725 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-208ENST00000585799 DEXIO95424 95 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 KIF5BP33176 963 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 KIF23Q02241 960 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 PLIN2Q99541 437 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 GOLGA8HP0CJ92 632 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 FGFR2P21802 821 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 MCM7P33993 719 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 VGLL2Q8N8G2 317 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 TRPM3Q9HCF6 1732 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 FAM177A1Q8N128 213 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 RCOR1Q9UKL0 485 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 MRC1P22897 1456 aa14.31□□□□□ -0.12
SMARCA4-208ENST00000585799 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 LY9Q9HBG7 655 aa14.3□□□□□ -0.12
SMARCA4-208ENST00000585799 CEP131Q9UPN4 1083 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms