RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 TRIM17Q9Y577 477 aa22.9■■□□□ 1.26
ATG4D-203ENST00000585752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-203ENST00000585752 SP3Q02447 781 aa22.89■■□□□ 1.25
ATG4D-203ENST00000585752 PPIL2Q13356 520 aa22.89■■□□□ 1.25
ATG4D-203ENST00000585752 TBC1D9Q6ZT07 1266 aa22.89■■□□□ 1.25
ATG4D-203ENST00000585752 ERC1Q8IUD2 1116 aa22.89■■□□□ 1.25
ATG4D-203ENST00000585752 PTPN18Q99952 460 aa22.89■■□□□ 1.25
ATG4D-203ENST00000585752 HPS5Q9UPZ3 1129 aa22.89■■□□□ 1.25
ATG4D-203ENST00000585752 MAP4K4O95819 1239 aaPredicted RBP22.88■■□□□ 1.25
ATG4D-203ENST00000585752 INPP5BP32019 993 aa22.88■■□□□ 1.25
ATG4D-203ENST00000585752 MCAMP43121 646 aa22.88■■□□□ 1.25
ATG4D-203ENST00000585752 PI16Q6UXB8 463 aa22.88■■□□□ 1.25
ATG4D-203ENST00000585752 BRI3BPQ8WY22 251 aa22.88■■□□□ 1.25
ATG4D-203ENST00000585752 CRBNQ96SW2 442 aa22.88■■□□□ 1.25
ATG4D-203ENST00000585752 GPR75-ASB3A0A0A6YYF3 556 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 IRF6O14896 467 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 BAG3O95817 575 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 HSP90AB4PQ58FF6 505 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 DBNDD2Q9BQY9 259 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 PICK1Q9NRD5 415 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 SNRKQ9NRH2 765 aa22.87■■□□□ 1.25
ATG4D-203ENST00000585752 NOP58Q9Y2X3 529 aaKnown RBP22.87■■□□□ 1.25
ATG4D-203ENST00000585752 SOX10P56693 466 aa22.86■■□□□ 1.25
ATG4D-203ENST00000585752 NAA16Q6N069 864 aaPredicted RBP22.86■■□□□ 1.25
ATG4D-203ENST00000585752 ZFPM1Q8IX07 1006 aa22.86■■□□□ 1.25
ATG4D-203ENST00000585752 CD99L2Q8TCZ2 262 aa22.86■■□□□ 1.25
ATG4D-203ENST00000585752 NSUN4Q96CB9 384 aaKnown RBP22.86■■□□□ 1.25
ATG4D-203ENST00000585752 ZNF112Q9UJU3 913 aa22.86■■□□□ 1.25
ATG4D-203ENST00000585752 RGS19P49795 217 aa22.85■■□□□ 1.25
ATG4D-203ENST00000585752 KIF22Q14807 665 aa22.85■■□□□ 1.25
ATG4D-203ENST00000585752 CCDC8Q9H0W5 538 aaPredicted RBP22.85■■□□□ 1.25
ATG4D-203ENST00000585752 EFCC1Q9HA90 598 aa22.85■■□□□ 1.25
ATG4D-203ENST00000585752 ZCCHC17Q9NP64 241 aaKnown RBP22.85■■□□□ 1.25
ATG4D-203ENST00000585752 PLCG2P16885 1265 aa22.84■■□□□ 1.25
ATG4D-203ENST00000585752 FAM43AQ8N2R8 423 aa22.84■■□□□ 1.25
ATG4D-203ENST00000585752 NOL9Q5SY16 702 aaKnown RBP22.83■■□□□ 1.25
ATG4D-203ENST00000585752 OTOP1Q7RTM1 612 aa22.83■■□□□ 1.25
ATG4D-203ENST00000585752 TEX11Q8IYF3 940 aa22.83■■□□□ 1.25
ATG4D-203ENST00000585752 EXOC6BQ9Y2D4 811 aa22.83■■□□□ 1.25
ATG4D-203ENST00000585752 MAST2Q6P0Q8 1798 aa22.83■■□□□ 1.24
ATG4D-203ENST00000585752 MYO5AQ9Y4I1 1855 aaKnown RBP22.83■■□□□ 1.24
ATG4D-203ENST00000585752 BTBD19C9JJ37 291 aa22.82■■□□□ 1.24
ATG4D-203ENST00000585752 SCYL3Q8IZE3 742 aa22.82■■□□□ 1.24
ATG4D-203ENST00000585752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.82■■□□□ 1.24
ATG4D-203ENST00000585752 DDTLA6NHG4 134 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-203ENST00000585752 IGSF3O75054 1194 aa22.81■■□□□ 1.24
ATG4D-203ENST00000585752 AAMPQ13685 434 aa22.81■■□□□ 1.24
ATG4D-203ENST00000585752 ZNF512BQ96KM6 892 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-203ENST00000585752 DDX4Q9NQI0 724 aaKnown RBP22.81■■□□□ 1.24
ATG4D-203ENST00000585752 DOCK1Q14185 1865 aa22.81■■□□□ 1.24
ATG4D-203ENST00000585752 NPM3O75607 178 aaKnown RBP22.8■■□□□ 1.24
ATG4D-203ENST00000585752 CENPBP07199 599 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-203ENST00000585752 AACSQ86V21 672 aa22.8■■□□□ 1.24
ATG4D-203ENST00000585752 TRIM34Q9BYJ4 488 aa22.8■■□□□ 1.24
ATG4D-203ENST00000585752 BCL11AQ9H165 835 aa22.8■■□□□ 1.24
ATG4D-203ENST00000585752 AATFQ9NY61 560 aaKnown RBP eCLIP22.8■■□□□ 1.24
ATG4D-203ENST00000585752 DBNLQ9UJU6 430 aaKnown RBP22.8■■□□□ 1.24
ATG4D-203ENST00000585752 ZHX2Q9Y6X8 837 aa22.8■■□□□ 1.24
ATG4D-203ENST00000585752 CXCL11O14625 94 aa22.79■■□□□ 1.24
ATG4D-203ENST00000585752 TLR2O60603 784 aa22.79■■□□□ 1.24
ATG4D-203ENST00000585752 CTNND1O60716 968 aaKnown RBP22.79■■□□□ 1.24
ATG4D-203ENST00000585752 ZAP70P43403 619 aa22.79■■□□□ 1.24
ATG4D-203ENST00000585752 RHBDL3P58872 404 aa22.79■■□□□ 1.24
ATG4D-203ENST00000585752 ANKRD23Q86SG2 305 aa22.79■■□□□ 1.24
ATG4D-203ENST00000585752 EAF2Q96CJ1 260 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-203ENST00000585752 PTPN22Q9Y2R2 807 aa22.79■■□□□ 1.24
ATG4D-203ENST00000585752 APBB1O00213 710 aa22.78■■□□□ 1.24
ATG4D-203ENST00000585752 PDHXO00330 501 aa22.78■■□□□ 1.24
ATG4D-203ENST00000585752 CYP2E1P05181 493 aaPredicted RBP22.78■■□□□ 1.24
ATG4D-203ENST00000585752 SH3BP5LQ7L8J4 393 aa22.78■■□□□ 1.24
ATG4D-203ENST00000585752 FASTKD5Q7L8L6 764 aaKnown RBP22.78■■□□□ 1.24
ATG4D-203ENST00000585752 CLASRPQ8N2M8 674 aaKnown RBP22.78■■□□□ 1.24
ATG4D-203ENST00000585752 OSBPL5Q9H0X9 879 aaPredicted RBP22.78■■□□□ 1.24
ATG4D-203ENST00000585752 KCNH4Q9UQ05 1017 aa22.78■■□□□ 1.24
ATG4D-203ENST00000585752 ATAD5Q96QE3 1844 aa22.78■■□□□ 1.24
ATG4D-203ENST00000585752 RFX7Q2KHR2 1363 aa22.77■■□□□ 1.24
ATG4D-203ENST00000585752 PHF20L1A8MW92 1017 aa22.77■■□□□ 1.24
ATG4D-203ENST00000585752 TBC1D12O60347 775 aa22.77■■□□□ 1.24
ATG4D-203ENST00000585752 IDH1O75874 414 aaKnown RBP22.77■■□□□ 1.24
ATG4D-203ENST00000585752 SIRT2Q8IXJ6 389 aa22.77■■□□□ 1.24
ATG4D-203ENST00000585752 SH3RF3Q8TEJ3 882 aaPredicted RBP22.77■■□□□ 1.24
ATG4D-203ENST00000585752 ZNF384Q8TF68 577 aa22.77■■□□□ 1.24
ATG4D-203ENST00000585752 RAB11FIP3O75154 756 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 IFIT2P09913 472 aaKnown RBP22.76■■□□□ 1.23
ATG4D-203ENST00000585752 PTPRAP18433 802 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 GADL1Q6ZQY3 521 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 RHPN1Q8TCX5 695 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 KIF1BPQ96EK5 621 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 PARK7Q99497 189 aaKnown RBP22.76■■□□□ 1.23
ATG4D-203ENST00000585752 DHX36Q9H2U1 1008 aaKnown RBP22.76■■□□□ 1.23
ATG4D-203ENST00000585752 IL1RAPL2Q9NP60 686 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 TLR7Q9NYK1 1049 aaKnown RBP22.76■■□□□ 1.23
ATG4D-203ENST00000585752 CDK5RAP2Q96SN8 1893 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 ATRNL1Q5VV63 1379 aa22.76■■□□□ 1.23
ATG4D-203ENST00000585752 CYP7A1P22680 504 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
ATG4D-203ENST00000585752 MAP3K10Q02779 954 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 MAP3K12Q12852 859 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 NBPF11Q86T75 865 aa22.75■■□□□ 1.23
ATG4D-203ENST00000585752 CERS3Q8IU89 383 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms