RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ATP5JP18859 108 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 BTDP43251 543 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 TTF1Q15361 905 aaPredicted RBP28.06■■■□□ 2.08
LSM7-202ENST00000585395 OTOP1Q7RTM1 612 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 CDAN1Q8IWY9 1227 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 ANKRD13AQ8IZ07 590 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 TEPSINQ96N21 525 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 MROH7-TTC4A0A0A0MT08 1334 aa28.06■■■□□ 2.08
LSM7-202ENST00000585395 RBBP6Q7Z6E9 1792 aaKnown RBP28.06■■■□□ 2.08
LSM7-202ENST00000585395 POTEFA5A3E0 1075 aa28.05■■■□□ 2.08
LSM7-202ENST00000585395 GAKO14976 1311 aa28.05■■■□□ 2.08
LSM7-202ENST00000585395 DCAF15Q66K64 600 aa28.05■■■□□ 2.08
LSM7-202ENST00000585395 CENPFP49454 3210 aa28.05■■■□□ 2.08
LSM7-202ENST00000585395 TTC41PQ6P2S7 1318 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 ERC2O15083 957 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 ERICH6BQ5W0A0 696 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 IFNL1Q8IU54 200 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 FAM151AQ8WW52 585 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 CLMNQ96JQ2 1002 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 CSADQ9Y600 493 aa28.04■■■□□ 2.08
LSM7-202ENST00000585395 RPAP1Q9BWH6 1393 aaPredicted RBP28.03■■■□□ 2.08
LSM7-202ENST00000585395 UNCXA6NJT0 531 aa28.03■■■□□ 2.08
LSM7-202ENST00000585395 ZAP70P43403 619 aa28.03■■■□□ 2.08
LSM7-202ENST00000585395 B4GALNT3Q6L9W6 998 aa28.03■■■□□ 2.08
LSM7-202ENST00000585395 TMED8Q6PL24 325 aaPredicted RBP28.03■■■□□ 2.08
LSM7-202ENST00000585395 OTOFQ9HC10 1997 aa28.02■■■□□ 2.08
LSM7-202ENST00000585395 ZSCAN29Q8IWY8 852 aaPredicted RBP28.02■■■□□ 2.08
LSM7-202ENST00000585395 KIAA0100Q14667 2235 aaKnown RBP28.02■■■□□ 2.08
LSM7-202ENST00000585395 MAST2Q6P0Q8 1798 aa28.01■■■□□ 2.08
LSM7-202ENST00000585395 ZBTB48P10074 688 aaPredicted RBP28.01■■■□□ 2.07
LSM7-202ENST00000585395 NFIAQ12857 509 aa28.01■■■□□ 2.07
LSM7-202ENST00000585395 PICALMQ13492 652 aa28.01■■■□□ 2.07
LSM7-202ENST00000585395 NAA16Q6N069 864 aaPredicted RBP28.01■■■□□ 2.07
LSM7-202ENST00000585395 CHD1LQ86WJ1 897 aa28.01■■■□□ 2.07
LSM7-202ENST00000585395 NSUN4Q96CB9 384 aaKnown RBP28.01■■■□□ 2.07
LSM7-202ENST00000585395 FAM163AQ96GL9 167 aaPredicted RBP28.01■■■□□ 2.07
LSM7-202ENST00000585395 ERO1AQ96HE7 468 aa28.01■■■□□ 2.07
LSM7-202ENST00000585395 WNK4Q96J92 1243 aa28.01■■■□□ 2.07
LSM7-202ENST00000585395 ELP3Q9H9T3 547 aa28.01■■■□□ 2.07
LSM7-202ENST00000585395 MX1P20591 662 aa28■■■□□ 2.07
LSM7-202ENST00000585395 FXR1P51114 621 aaKnown RBP eCLIP28■■■□□ 2.07
LSM7-202ENST00000585395 MAP3K9P80192 1104 aa28■■■□□ 2.07
LSM7-202ENST00000585395 NUCB1Q02818 461 aa28■■■□□ 2.07
LSM7-202ENST00000585395 DNAJC2Q99543 621 aaKnown RBP28■■■□□ 2.07
LSM7-202ENST00000585395 CYP2E1P05181 493 aaPredicted RBP27.99■■■□□ 2.07
LSM7-202ENST00000585395 RGS3P49796 1198 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 MAP3K12Q12852 859 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 WRNIP1Q96S55 665 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 ZNF341Q9BYN7 854 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 LNPKQ9C0E8 428 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 BOLA2Q9H3K6 86 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 PTPN22Q9Y2R2 807 aa27.99■■■□□ 2.07
LSM7-202ENST00000585395 GLRX3O76003 335 aaKnown RBP27.98■■■□□ 2.07
LSM7-202ENST00000585395 MIGA2Q7L4E1 593 aa27.98■■■□□ 2.07
LSM7-202ENST00000585395 ARMC5Q96C12 935 aa27.98■■■□□ 2.07
LSM7-202ENST00000585395 HAUS7Q99871 368 aa27.98■■■□□ 2.07
LSM7-202ENST00000585395 FAM198AQ9UFP1 575 aa27.98■■■□□ 2.07
LSM7-202ENST00000585395 LAMB1P07942 1786 aa27.98■■■□□ 2.07
LSM7-202ENST00000585395 GPR75-ASB3A0A0A6YYF3 556 aa27.97■■■□□ 2.07
LSM7-202ENST00000585395 ENTPD3O75355 529 aa27.97■■■□□ 2.07
LSM7-202ENST00000585395 IDH1O75874 414 aaKnown RBP27.97■■■□□ 2.07
LSM7-202ENST00000585395 BAG3O95817 575 aa27.97■■■□□ 2.07
LSM7-202ENST00000585395 IDI2Q9BXS1 227 aa27.97■■■□□ 2.07
LSM7-202ENST00000585395 PAG1Q9NWQ8 432 aa27.97■■■□□ 2.07
LSM7-202ENST00000585395 DOCK2Q92608 1830 aa27.97■■■□□ 2.07
LSM7-202ENST00000585395 MYO5AQ9Y4I1 1855 aaKnown RBP27.96■■■□□ 2.07
LSM7-202ENST00000585395 VGLL4Q14135 290 aa27.96■■■□□ 2.07
LSM7-202ENST00000585395 OPTNQ96CV9 577 aa27.96■■■□□ 2.07
LSM7-202ENST00000585395 CCDC136Q96JN2 1154 aa27.96■■■□□ 2.07
LSM7-202ENST00000585395 IGF2BP3O00425 579 aaKnown RBP eCLIP27.95■■■□□ 2.06
LSM7-202ENST00000585395 GOLIM4O00461 696 aa27.95■■■□□ 2.06
LSM7-202ENST00000585395 OTUD7BQ6GQQ9 843 aa27.95■■■□□ 2.06
LSM7-202ENST00000585395 CENPQQ7L2Z9 268 aaPredicted RBP27.95■■■□□ 2.06
LSM7-202ENST00000585395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.95■■■□□ 2.061e-14■■■□□ 16.2
LSM7-202ENST00000585395 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.95■■■□□ 2.063e-9■□□□□ 8.1
LSM7-202ENST00000585395 MAP4K4O95819 1239 aaPredicted RBP27.94■■■□□ 2.06
LSM7-202ENST00000585395 LRRFIP1Q32MZ4 808 aaKnown RBP27.94■■■□□ 2.06
LSM7-202ENST00000585395 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.94■■■□□ 2.06
LSM7-202ENST00000585395 TEX11Q8IYF3 940 aa27.94■■■□□ 2.06
LSM7-202ENST00000585395 ZNF384Q8TF68 577 aa27.94■■■□□ 2.06
LSM7-202ENST00000585395 PIH1D3Q9NQM4 214 aaKnown RBP27.94■■■□□ 2.06
LSM7-202ENST00000585395 BRCA2P51587 3418 aa27.94■■■□□ 2.06
LSM7-202ENST00000585395 PLCG2P16885 1265 aa27.93■■■□□ 2.06
LSM7-202ENST00000585395 EN2P19622 333 aaPredicted RBP27.93■■■□□ 2.06
LSM7-202ENST00000585395 CD99L2Q8TCZ2 262 aa27.93■■■□□ 2.06
LSM7-202ENST00000585395 EFCC1Q9HA90 598 aa27.93■■■□□ 2.06
LSM7-202ENST00000585395 AATFQ9NY61 560 aaKnown RBP eCLIP27.93■■■□□ 2.06
LSM7-202ENST00000585395 STAP2Q9UGK3 403 aa27.93■■■□□ 2.06
LSM7-202ENST00000585395 NDUFB9Q9Y6M9 179 aa27.93■■■□□ 2.06
LSM7-202ENST00000585395 WDHD1O75717 1129 aaPredicted RBP27.92■■■□□ 2.06
LSM7-202ENST00000585395 ZSCAN25Q6NSZ9 544 aa27.92■■■□□ 2.06
LSM7-202ENST00000585395 CERS3Q8IU89 383 aa27.92■■■□□ 2.06
LSM7-202ENST00000585395 ZFPM1Q8IX07 1006 aa27.92■■■□□ 2.06
LSM7-202ENST00000585395 OTUD5Q96G74 571 aa27.92■■■□□ 2.06
LSM7-202ENST00000585395 CYP7A1P22680 504 aa27.91■■■□□ 2.06
LSM7-202ENST00000585395 RHBDL3P58872 404 aa27.91■■■□□ 2.06
LSM7-202ENST00000585395 CRHR2Q13324 411 aa27.91■■■□□ 2.06
LSM7-202ENST00000585395 ZKSCAN4Q969J2 545 aaPredicted RBP27.91■■■□□ 2.06
LSM7-202ENST00000585395 DDX4Q9NQI0 724 aaKnown RBP27.91■■■□□ 2.06
LSM7-202ENST00000585395 SALL3Q9BXA9 1300 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms