RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 COL2A1P02458 1487 aaPredicted RBP19.21■□□□□ 0.67
SS18-226ENST00000585241 WNT10BO00744 389 aa19.2■□□□□ 0.66
SS18-226ENST00000585241 ZNF213O14771 459 aa19.2■□□□□ 0.66
SS18-226ENST00000585241 KRT32Q14532 448 aa19.2■□□□□ 0.66
SS18-226ENST00000585241 FKBP1CQ5VVH2 108 aa19.2■□□□□ 0.66
SS18-226ENST00000585241 MAPKAPK5Q8IW41 473 aa19.2■□□□□ 0.66
SS18-226ENST00000585241 IL27Q8NEV9 243 aa19.2■□□□□ 0.66
SS18-226ENST00000585241 TDRD3Q9H7E2 651 aaKnown RBP19.2■□□□□ 0.66
SS18-226ENST00000585241 RBM19Q9Y4C8 960 aaKnown RBP19.2■□□□□ 0.66
SS18-226ENST00000585241 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 USP17L12C9JPN9 530 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 USP17L21D6R901 530 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 H7C1D1 291 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 ENTPD3O75355 529 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 PPARAQ07869 468 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 NFIAQ12857 509 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 DPY19L2Q6NUT2 758 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 STOX1Q6ZVD7 989 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 MCM9Q9NXL9 1143 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 ZNF70Q9UC06 446 aaPredicted RBP19.19■□□□□ 0.66
SS18-226ENST00000585241 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
SS18-226ENST00000585241 MYH1P12882 1939 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 GLTPD2A6NH11 291 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 EGFRP00533 1210 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 HAND2P61296 217 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 RABEP1Q15276 862 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 KIF4BQ2VIQ3 1234 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 C12orf60Q5U649 245 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 TBC1D10CQ8IV04 446 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 OSBPL5Q9H0X9 879 aaPredicted RBP19.18■□□□□ 0.66
SS18-226ENST00000585241 UTRNP46939 3433 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 ATRNL1Q5VV63 1379 aa19.18■□□□□ 0.66
SS18-226ENST00000585241 E7EWF7 191 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 FGRP09769 529 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 PCP11498 1178 aaKnown RBP19.17■□□□□ 0.66
SS18-226ENST00000585241 NBPF9Q3BBW0 867 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 ADCK5Q3MIX3 580 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 SAMD7Q7Z3H4 446 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 TMOD2Q9NZR1 351 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 WDR90Q96KV7 1748 aa19.17■□□□□ 0.66
SS18-226ENST00000585241 MYO1BO43795 1136 aa19.16■□□□□ 0.66
SS18-226ENST00000585241 PSMA5P28066 241 aa19.16■□□□□ 0.66
SS18-226ENST00000585241 LMOD1P29536 600 aaPredicted RBP19.16■□□□□ 0.66
SS18-226ENST00000585241 EPS15P42566 896 aa19.16■□□□□ 0.66
SS18-226ENST00000585241 AMOTL1Q8IY63 956 aa19.16■□□□□ 0.66
SS18-226ENST00000585241 ZSWIM6Q9HCJ5 1215 aa19.16■□□□□ 0.66
SS18-226ENST00000585241 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
SS18-226ENST00000585241 CYP2D7A0A087X1C5 515 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 CYP2D6P10635 497 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 NT5C2P49902 561 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 CACNB3P54284 484 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 PICALMQ13492 652 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 TBC1D10BQ4KMP7 808 aaPredicted RBP19.15■□□□□ 0.66
SS18-226ENST00000585241 AKNAD1Q5T1N1 836 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 FAM83AQ86UY5 434 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 TRPM4Q8TD43 1214 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 JAKMIP1Q96N16 626 aaKnown RBP19.15■□□□□ 0.66
SS18-226ENST00000585241 DHX36Q9H2U1 1008 aaKnown RBP19.15■□□□□ 0.66
SS18-226ENST00000585241 RNF41Q9H4P4 317 aaPredicted RBP19.15■□□□□ 0.66
SS18-226ENST00000585241 ADARB2Q9NS39 739 aaKnown RBP19.15■□□□□ 0.66
SS18-226ENST00000585241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.15■□□□□ 0.66
SS18-226ENST00000585241 TACC3Q9Y6A5 838 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 SCN4AP35499 1836 aa19.15■□□□□ 0.66
SS18-226ENST00000585241 CLRN2A0PK11 232 aa19.14■□□□□ 0.65
SS18-226ENST00000585241 MINDY4BA8MYZ0 360 aa19.14■□□□□ 0.65
SS18-226ENST00000585241 CTDSPL2Q05D32 466 aa19.14■□□□□ 0.65
SS18-226ENST00000585241 TTC6Q86TZ1 520 aa19.14■□□□□ 0.65
SS18-226ENST00000585241 NEK1Q96PY6 1258 aa19.14■□□□□ 0.65
SS18-226ENST00000585241 SAP30BPQ9UHR5 308 aaKnown RBP19.14■□□□□ 0.65
SS18-226ENST00000585241 CNTNAP1P78357 1384 aa19.14■□□□□ 0.65
SS18-226ENST00000585241 SMIM22K7EJ46 135 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 ORC4O43929 436 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
SS18-226ENST00000585241 HMGB1P09429 215 aaKnown RBP19.13■□□□□ 0.65
SS18-226ENST00000585241 CASTP20810 708 aaKnown RBP19.13■□□□□ 0.65
SS18-226ENST00000585241 PLCD1P51178 756 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 EVX2Q03828 476 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 GABPAQ06546 454 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 ZFPM1Q8IX07 1006 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 MB21D2Q8IYB1 491 aaPredicted RBP19.13■□□□□ 0.65
SS18-226ENST00000585241 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 FAM151AQ8WW52 585 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 EHD4Q9H223 541 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 CNNM2Q9H8M5 875 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 SIPA1L1O43166 1804 aa19.13■□□□□ 0.65
SS18-226ENST00000585241 NEDD4P46934 1319 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 WDR19Q8NEZ3 1342 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 SLC3A2P08195 630 aaKnown RBP19.12■□□□□ 0.65
SS18-226ENST00000585241 HIRAP54198 1017 aaPredicted RBP19.12■□□□□ 0.65
SS18-226ENST00000585241 RBM26Q5T8P6 1007 aaKnown RBP19.12■□□□□ 0.65
SS18-226ENST00000585241 BLOC1S2Q6QNY1 142 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 MFSD6Q6ZSS7 791 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 C16orf86Q6ZW13 317 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 RUFY3Q7L099 469 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 SH3BP5LQ7L8J4 393 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 PGAP2Q9UHJ9 254 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 HACL1Q9UJ83 578 aa19.12■□□□□ 0.65
SS18-226ENST00000585241 PITPNM2Q9BZ72 1349 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms