RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CETPP11597 493 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 PLCG2P16885 1265 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 ZAP70P43403 619 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 PPIL2Q13356 520 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 SNAPC2Q13487 334 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 PKN2Q16513 984 aaKnown RBP15.12■□□□□ 0.01
SS18-225ENST00000585121 CCL15Q16663 113 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 ZFPM1Q8IX07 1006 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 CLASRPQ8N2M8 674 aaKnown RBP15.12■□□□□ 0.01
SS18-225ENST00000585121 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 ZNF112Q9UJU3 913 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 APBB1O00213 710 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
SS18-225ENST00000585121 CYP2E1P05181 493 aaPredicted RBP15.12■□□□□ 0.01
SS18-225ENST00000585121 RHBDL3P58872 404 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 PPATQ06203 517 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 TEX11Q8IYF3 940 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 ZNF384Q8TF68 577 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 MS4A4AQ96JQ5 239 aa15.12■□□□□ 0.01
SS18-225ENST00000585121 TLR7Q9NYK1 1049 aaKnown RBP15.12■□□□□ 0.01
SS18-225ENST00000585121 MYH2Q9UKX2 1941 aa15.11■□□□□ 0.01
SS18-225ENST00000585121 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
SS18-225ENST00000585121 INPP5BP32019 993 aa15.11■□□□□ 0.01
SS18-225ENST00000585121 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
SS18-225ENST00000585121 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
SS18-225ENST00000585121 PICK1Q9NRD5 415 aa15.11■□□□□ 0.01
SS18-225ENST00000585121 IRF6O14896 467 aa15.1■□□□□ 0.01
SS18-225ENST00000585121 NOL9Q5SY16 702 aaKnown RBP15.1■□□□□ 0.01
SS18-225ENST00000585121 C20orf194Q5TEA3 1177 aa15.1■□□□□ 0.01
SS18-225ENST00000585121 BRI3BPQ8WY22 251 aa15.1■□□□□ 0.01
SS18-225ENST00000585121 PTPN18Q99952 460 aa15.1■□□□□ 0.01
SS18-225ENST00000585121 R3HDMLQ9H3Y0 253 aa15.1■□□□□ 0.01
SS18-225ENST00000585121 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
SS18-225ENST00000585121 DDTLA6NHG4 134 aaPredicted RBP15.09■□□□□ 0.01
SS18-225ENST00000585121 IDH1O75874 414 aaKnown RBP15.09■□□□□ 0.01
SS18-225ENST00000585121 CRHR2Q13324 411 aa15.09■□□□□ 0.01
SS18-225ENST00000585121 TAF1CQ15572 869 aaPredicted RBP15.09■□□□□ 0.01
SS18-225ENST00000585121 SH3BP5LQ7L8J4 393 aa15.09■□□□□ 0.01
SS18-225ENST00000585121 SIRT2Q8IXJ6 389 aa15.09■□□□□ 0.01
SS18-225ENST00000585121 BCL11AQ9H165 835 aa15.09■□□□□ 0.01
SS18-225ENST00000585121 AATFQ9NY61 560 aaKnown RBP eCLIP15.09■□□□□ 0.01
SS18-225ENST00000585121 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
SS18-225ENST00000585121 RFX7Q2KHR2 1363 aa15.09■□□□□ 0.01
SS18-225ENST00000585121 CYP7A1P22680 504 aa15.08■□□□□ 0.01
SS18-225ENST00000585121 PPP4CP60510 307 aa15.08■□□□□ 0.01
SS18-225ENST00000585121 MAP3K12Q12852 859 aa15.08■□□□□ 0.01
SS18-225ENST00000585121 TMED8Q6PL24 325 aaPredicted RBP15.08■□□□□ 0.01
SS18-225ENST00000585121 CERS3Q8IU89 383 aa15.08■□□□□ 0.01
SS18-225ENST00000585121 SH3RF3Q8TEJ3 882 aaPredicted RBP15.08■□□□□ 0.01
SS18-225ENST00000585121 ERO1AQ96HE7 468 aa15.08■□□□□ 0.01
SS18-225ENST00000585121 ZCCHC17Q9NP64 241 aaKnown RBP15.08■□□□□ 0.01
SS18-225ENST00000585121 PIH1D3Q9NQM4 214 aaKnown RBP15.08■□□□□ 0.01
SS18-225ENST00000585121 TBC1D12O60347 775 aa15.07■□□□□ 0
SS18-225ENST00000585121 CTNND1O60716 968 aaKnown RBP15.07■□□□□ 0
SS18-225ENST00000585121 MAP3K10Q02779 954 aa15.07■□□□□ 0
SS18-225ENST00000585121 ARHGEF6Q15052 776 aa15.07■□□□□ 0
SS18-225ENST00000585121 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
SS18-225ENST00000585121 SCYL3Q8IZE3 742 aa15.07■□□□□ 0
SS18-225ENST00000585121 OSBPL5Q9H0X9 879 aaPredicted RBP15.07■□□□□ 0
SS18-225ENST00000585121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.07■□□□□ 0
SS18-225ENST00000585121 OTOFQ9HC10 1997 aa15.07■□□□□ 0
SS18-225ENST00000585121 PHF20L1A8MW92 1017 aa15.07■□□□□ 0
SS18-225ENST00000585121 CXCL11O14625 94 aa15.07■□□□□ 0
SS18-225ENST00000585121 SP3Q02447 781 aa15.07■□□□□ 0
SS18-225ENST00000585121 DHX36Q9H2U1 1008 aaKnown RBP15.07■□□□□ 0
SS18-225ENST00000585121 KCNH4Q9UQ05 1017 aa15.07■□□□□ 0
SS18-225ENST00000585121 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
SS18-225ENST00000585121 BTBD19C9JJ37 291 aa15.06■□□□□ 0
SS18-225ENST00000585121 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
SS18-225ENST00000585121 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
SS18-225ENST00000585121 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
SS18-225ENST00000585121 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
SS18-225ENST00000585121 TRIM34Q9BYJ4 488 aa15.06■□□□□ 0
SS18-225ENST00000585121 ZHX2Q9Y6X8 837 aa15.06■□□□□ 0
SS18-225ENST00000585121 FBXO46Q6PJ61 603 aaPredicted RBP15.05■□□□□ -0
SS18-225ENST00000585121 MAPKAPK5Q8IW41 473 aa15.05■□□□□ -0
SS18-225ENST00000585121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.05■□□□□ -0
SS18-225ENST00000585121 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
SS18-225ENST00000585121 PI4KBQ9UBF8 816 aa15.05■□□□□ -0
SS18-225ENST00000585121 TRIM17Q9Y577 477 aa15.05■□□□□ -0
SS18-225ENST00000585121 COL2A1P02458 1487 aaPredicted RBP15.05■□□□□ -0
SS18-225ENST00000585121 PTPRAP18433 802 aa15.04■□□□□ -0
SS18-225ENST00000585121 FASTKD5Q7L8L6 764 aaKnown RBP15.04■□□□□ -0
SS18-225ENST00000585121 ANKRD23Q86SG2 305 aa15.04■□□□□ -0
SS18-225ENST00000585121 ADGRA1Q86SQ6 560 aa15.04■□□□□ -0
SS18-225ENST00000585121 DNAJC2Q99543 621 aaKnown RBP15.04■□□□□ -0
SS18-225ENST00000585121 ANTXR1Q9H6X2 564 aa15.04■□□□□ -0
SS18-225ENST00000585121 HERC5Q9UII4 1024 aaKnown RBP15.04■□□□□ -0
SS18-225ENST00000585121 HPS5Q9UPZ3 1129 aa15.04■□□□□ -0
SS18-225ENST00000585121 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
SS18-225ENST00000585121 HLA-DOAP06340 250 aa15.03■□□□□ -0
SS18-225ENST00000585121 USP5P45974 858 aa15.03■□□□□ -0
SS18-225ENST00000585121 KIF22Q14807 665 aa15.03■□□□□ -0
SS18-225ENST00000585121 MIGA1Q8NAN2 632 aa15.03■□□□□ -0
SS18-225ENST00000585121 CD99L2Q8TCZ2 262 aa15.03■□□□□ -0
SS18-225ENST00000585121 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SS18-225ENST00000585121 PDHXO00330 501 aa15.02■□□□□ -0
SS18-225ENST00000585121 GOLIM4O00461 696 aa15.02■□□□□ -0
SS18-225ENST00000585121 TLR2O60603 784 aa15.02■□□□□ -0
SS18-225ENST00000585121 DYNLL1P63167 89 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms