RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 EIF4BP23588 611 aaKnown RBP8.23□□□□□ -1.09
NLK-206ENST00000584878 CDK5R2Q13319 367 aa8.23□□□□□ -1.09
NLK-206ENST00000584878 ZNF765Q7L2R6 523 aa8.23□□□□□ -1.09
NLK-206ENST00000584878 GIMAP7Q8NHV1 300 aa8.23□□□□□ -1.09
NLK-206ENST00000584878 PCNX4Q63HM2 1172 aa8.22□□□□□ -1.09
NLK-206ENST00000584878 INTS5Q6P9B9 1019 aaKnown RBP8.22□□□□□ -1.09
NLK-206ENST00000584878 FAM161BQ96MY7 647 aa8.22□□□□□ -1.09
NLK-206ENST00000584878 DCDC2CA8MYV0 355 aa8.21□□□□□ -1.1
NLK-206ENST00000584878 TAGLNQ01995 201 aaKnown RBP8.21□□□□□ -1.1
NLK-206ENST00000584878 ZC3H12AQ5D1E8 599 aaKnown RBP8.21□□□□□ -1.1
NLK-206ENST00000584878 LLGL2Q6P1M3 1020 aa8.21□□□□□ -1.1
NLK-206ENST00000584878 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.1
NLK-206ENST00000584878 LRRC4CQ9HCJ2 640 aa8.21□□□□□ -1.1
NLK-206ENST00000584878 CACNA2D2Q9NY47 1150 aa8.21□□□□□ -1.1
NLK-206ENST00000584878 PARP2Q9UGN5 583 aa8.21□□□□□ -1.1
NLK-206ENST00000584878 FOSL1P15407 271 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 COL19A1Q14993 1142 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 PPM1JQ5JR12 505 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 DTX1Q86Y01 620 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 ISL2Q96A47 359 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 FRMD6Q96NE9 622 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 METTL22Q9BUU2 404 aaPredicted RBP8.2□□□□□ -1.1
NLK-206ENST00000584878 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 AK5Q9Y6K8 562 aa8.2□□□□□ -1.1
NLK-206ENST00000584878 CYP26A1O43174 497 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
NLK-206ENST00000584878 PTPN11Q06124 597 aaPredicted RBP8.19□□□□□ -1.1
NLK-206ENST00000584878 MSMPQ1L6U9 139 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 UBE3DQ7Z6J8 389 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 ANKRD24Q8TF21 1146 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 PCDHA4Q9UN74 947 aa8.19□□□□□ -1.1
NLK-206ENST00000584878 TRIM37O94972 964 aa8.18□□□□□ -1.1
NLK-206ENST00000584878 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
NLK-206ENST00000584878 FBXO33Q7Z6M2 555 aa8.18□□□□□ -1.1
NLK-206ENST00000584878 SSU72Q9NP77 194 aaKnown RBP8.18□□□□□ -1.1
NLK-206ENST00000584878 LEFTY1O75610 366 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 FAM87AP0C7U9 286 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 NTF4P34130 210 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 ERVK-24P63145 666 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 PSMD2Q13200 908 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 LRRC14Q15048 493 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
NLK-206ENST00000584878 CCDC27Q2M243 656 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 DUSP27Q5VZP5 1158 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 TTBK2Q6IQ55 1244 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
NLK-206ENST00000584878 RNF214Q8ND24 703 aa8.17□□□□□ -1.1
NLK-206ENST00000584878 OAS3Q9Y6K5 1087 aaKnown RBP8.17□□□□□ -1.1
NLK-206ENST00000584878 CDK8P49336 464 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 INPP5AQ14642 412 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 CPSF6Q16630 551 aaKnown RBP eCLIP8.16□□□□□ -1.1
NLK-206ENST00000584878 OGFOD3Q6PK18 319 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 SV2BQ7L1I2 683 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 GAL3ST3Q96A11 431 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 PICK1Q9NRD5 415 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 ZC3H7BQ9UGR2 993 aaKnown RBP8.16□□□□□ -1.1
NLK-206ENST00000584878 U3KQE9 123 aa8.16□□□□□ -1.1
NLK-206ENST00000584878 GP2P55259 537 aaKnown RBP8.15□□□□□ -1.1
NLK-206ENST00000584878 DAB2P98082 770 aa8.15□□□□□ -1.1
NLK-206ENST00000584878 LRFN4Q6PJG9 635 aa8.15□□□□□ -1.1
NLK-206ENST00000584878 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.15□□□□□ -1.1
NLK-206ENST00000584878 FAM181AQ8N9Y4 354 aa8.15□□□□□ -1.1
NLK-206ENST00000584878 PCOLCE2Q9UKZ9 415 aa8.15□□□□□ -1.1
NLK-206ENST00000584878 CYP8B1Q9UNU6 501 aa8.15□□□□□ -1.1
NLK-206ENST00000584878 PCDHB5Q9Y5E4 795 aa8.15□□□□□ -1.1
NLK-206ENST00000584878 CTSHP09668 335 aa8.14□□□□□ -1.11
NLK-206ENST00000584878 XPCQ01831 940 aaPredicted RBP8.14□□□□□ -1.11
NLK-206ENST00000584878 CYP27A1Q02318 531 aa8.14□□□□□ -1.11
NLK-206ENST00000584878 SEPT6Q14141 434 aa8.14□□□□□ -1.11
NLK-206ENST00000584878 TOP6BLQ8N6T0 577 aa8.14□□□□□ -1.11
NLK-206ENST00000584878 ELMO3Q96BJ8 720 aa8.14□□□□□ -1.11
NLK-206ENST00000584878 PRAMEF27A3QJZ7 478 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 WNT11O96014 354 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 FGD1P98174 961 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 RING1Q06587 406 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 ZBTB37Q5TC79 503 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 PLPPR2Q96GM1 343 aa8.13□□□□□ -1.11
NLK-206ENST00000584878 F6X3S4 739 aa8.12□□□□□ -1.11
NLK-206ENST00000584878 LIG3P49916 1009 aa8.12□□□□□ -1.11
NLK-206ENST00000584878 LCE3BQ5TA77 95 aa8.12□□□□□ -1.11
NLK-206ENST00000584878 TMC4Q7Z404 712 aa8.12□□□□□ -1.11
NLK-206ENST00000584878 DUSP23Q9BVJ7 150 aa8.12□□□□□ -1.11
NLK-206ENST00000584878 CCDC39Q9UFE4 941 aa8.12□□□□□ -1.11
NLK-206ENST00000584878 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
NLK-206ENST00000584878 CYP27C1Q4G0S4 372 aa8.11□□□□□ -1.11
NLK-206ENST00000584878 WIPI1Q5MNZ9 446 aaPredicted RBP8.11□□□□□ -1.11
NLK-206ENST00000584878 PLD6Q8N2A8 252 aaKnown RBP8.1□□□□□ -1.11
NLK-206ENST00000584878 KRTAP4-12Q9BQ66 201 aa8.1□□□□□ -1.11
NLK-206ENST00000584878 FBRSQ9HAH7 460 aa8.1□□□□□ -1.11
NLK-206ENST00000584878 BSDC1Q9NW68 430 aaPredicted RBP8.1□□□□□ -1.11
NLK-206ENST00000584878 TLR6Q9Y2C9 796 aa8.1□□□□□ -1.11
NLK-206ENST00000584878 FANCGO15287 622 aa8.09□□□□□ -1.11
NLK-206ENST00000584878 PRNPP04156 253 aa8.09□□□□□ -1.11
NLK-206ENST00000584878 TFE3P19532 575 aaPredicted RBP8.09□□□□□ -1.11
NLK-206ENST00000584878 TAF1CQ15572 869 aaPredicted RBP8.09□□□□□ -1.11
NLK-206ENST00000584878 VSIG10LQ86VR7 867 aa8.09□□□□□ -1.11
NLK-206ENST00000584878 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms