RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 TCP10Q12799 353 aa25.37■■□□□ 1.65
TOP3A-218ENST00000584669 WRNIP1Q96S55 665 aa25.37■■□□□ 1.65
TOP3A-218ENST00000584669 PCDHB15Q9Y5E8 787 aa25.37■■□□□ 1.65
TOP3A-218ENST00000584669 FOCADQ5VW36 1801 aa25.37■■□□□ 1.65
TOP3A-218ENST00000584669 BTDP43251 543 aa25.36■■□□□ 1.65
TOP3A-218ENST00000584669 HOOK2Q96ED9 719 aa25.36■■□□□ 1.65
TOP3A-218ENST00000584669 PTPN18Q99952 460 aa25.36■■□□□ 1.65
TOP3A-218ENST00000584669 PIH1D3Q9NQM4 214 aaKnown RBP25.36■■□□□ 1.65
TOP3A-218ENST00000584669 FAM198AQ9UFP1 575 aa25.36■■□□□ 1.65
TOP3A-218ENST00000584669 TRIM17Q9Y577 477 aa25.36■■□□□ 1.65
TOP3A-218ENST00000584669 CCL15-CCL14A0A0B4J2E2 113 aa25.35■■□□□ 1.65
TOP3A-218ENST00000584669 CCL15Q16663 113 aa25.35■■□□□ 1.65
TOP3A-218ENST00000584669 DCAF15Q66K64 600 aa25.35■■□□□ 1.65
TOP3A-218ENST00000584669 BRI3BPQ8WY22 251 aa25.35■■□□□ 1.65
TOP3A-218ENST00000584669 RPAP1Q9BWH6 1393 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-218ENST00000584669 GPR75-ASB3A0A0A6YYF3 556 aa25.34■■□□□ 1.65
TOP3A-218ENST00000584669 TESPA1A2RU30 521 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-218ENST00000584669 SMARCA5O60264 1052 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-218ENST00000584669 IFIT2P09913 472 aaKnown RBP25.34■■□□□ 1.65
TOP3A-218ENST00000584669 GTF2A2P52657 109 aa25.34■■□□□ 1.65
TOP3A-218ENST00000584669 GSTO1P78417 241 aa25.34■■□□□ 1.65
TOP3A-218ENST00000584669 MIGA2Q7L4E1 593 aa25.34■■□□□ 1.65
TOP3A-218ENST00000584669 FAM151AQ8WW52 585 aa25.34■■□□□ 1.65
TOP3A-218ENST00000584669 ZKSCAN4Q969J2 545 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-218ENST00000584669 MS4A4AQ96JQ5 239 aa25.34■■□□□ 1.65
TOP3A-218ENST00000584669 MYH7P12883 1935 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 RFX7Q2KHR2 1363 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 LDHCP07864 332 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 ZFPM1Q8IX07 1006 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 CD99L2Q8TCZ2 262 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 ERO1AQ96HE7 468 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 SNCAIPQ9Y6H5 919 aa25.33■■□□□ 1.65
TOP3A-218ENST00000584669 SPDYE5A6NIY4 337 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 RGS3P49796 1198 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 TAF1CQ15572 869 aaPredicted RBP25.32■■□□□ 1.64
TOP3A-218ENST00000584669 NAA16Q6N069 864 aaPredicted RBP25.32■■□□□ 1.64
TOP3A-218ENST00000584669 ZNF341Q9BYN7 854 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 LRRCC1Q9C099 1032 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 ANTXR1Q9H6X2 564 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 DCTPP1Q9H773 170 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 PDE4DIPQ5VU43 2346 aa25.32■■□□□ 1.64
TOP3A-218ENST00000584669 RHBDL3P58872 404 aa25.31■■□□□ 1.64
TOP3A-218ENST00000584669 OTOP1Q7RTM1 612 aa25.31■■□□□ 1.64
TOP3A-218ENST00000584669 IDI2Q9BXS1 227 aa25.31■■□□□ 1.64
TOP3A-218ENST00000584669 DDX4Q9NQI0 724 aaKnown RBP25.31■■□□□ 1.64
TOP3A-218ENST00000584669 WDHD1O75717 1129 aaPredicted RBP25.3■■□□□ 1.64
TOP3A-218ENST00000584669 ADGRA1Q86SQ6 560 aa25.3■■□□□ 1.64
TOP3A-218ENST00000584669 ERO1BQ86YB8 467 aa25.3■■□□□ 1.64
TOP3A-218ENST00000584669 SP3Q02447 781 aa25.29■■□□□ 1.64
TOP3A-218ENST00000584669 PICALMQ13492 652 aa25.29■■□□□ 1.64
TOP3A-218ENST00000584669 ZFYVE28Q9HCC9 887 aa25.29■■□□□ 1.64
TOP3A-218ENST00000584669 MYH1P12882 1939 aa25.28■■□□□ 1.64
TOP3A-218ENST00000584669 ENTPD3O75355 529 aa25.28■■□□□ 1.64
TOP3A-218ENST00000584669 IDH1O75874 414 aaKnown RBP25.28■■□□□ 1.64
TOP3A-218ENST00000584669 CETPP11597 493 aa25.28■■□□□ 1.64
TOP3A-218ENST00000584669 INPP5BP32019 993 aa25.28■■□□□ 1.64
TOP3A-218ENST00000584669 FAM43AQ8N2R8 423 aa25.28■■□□□ 1.64
TOP3A-218ENST00000584669 SNAPC2Q13487 334 aa25.27■■□□□ 1.64
TOP3A-218ENST00000584669 SH3RF3Q8TEJ3 882 aaPredicted RBP25.27■■□□□ 1.64
TOP3A-218ENST00000584669 EFCC1Q9HA90 598 aa25.27■■□□□ 1.64
TOP3A-218ENST00000584669 AATFQ9NY61 560 aaKnown RBP eCLIP25.27■■□□□ 1.64
TOP3A-218ENST00000584669 SIPA1L1O43166 1804 aa25.26■■□□□ 1.63
TOP3A-218ENST00000584669 IRF6O14896 467 aa25.26■■□□□ 1.63
TOP3A-218ENST00000584669 PPIL2Q13356 520 aa25.26■■□□□ 1.63
TOP3A-218ENST00000584669 SH3BP5LQ7L8J4 393 aa25.26■■□□□ 1.63
TOP3A-218ENST00000584669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.26■■□□□ 1.63
TOP3A-218ENST00000584669 DNAJC2Q99543 621 aaKnown RBP25.26■■□□□ 1.63
TOP3A-218ENST00000584669 SUPT16HQ9Y5B9 1047 aaKnown RBP25.26■■□□□ 1.63
TOP3A-218ENST00000584669 ZSCAN29Q8IWY8 852 aaPredicted RBP25.25■■□□□ 1.63
TOP3A-218ENST00000584669 MAGEB6Q8N7X4 407 aa25.25■■□□□ 1.63
TOP3A-218ENST00000584669 EDC3Q96F86 508 aaKnown RBP25.25■■□□□ 1.63
TOP3A-218ENST00000584669 NOL10Q9BSC4 688 aaKnown RBP25.25■■□□□ 1.63
TOP3A-218ENST00000584669 ATAD5Q96QE3 1844 aa25.24■■□□□ 1.63
TOP3A-218ENST00000584669 DDTLA6NHG4 134 aaPredicted RBP25.24■■□□□ 1.63
TOP3A-218ENST00000584669 CYP7A1P22680 504 aa25.24■■□□□ 1.63
TOP3A-218ENST00000584669 TEX11Q8IYF3 940 aa25.24■■□□□ 1.63
TOP3A-218ENST00000584669 BOLA2Q9H3K6 86 aa25.24■■□□□ 1.63
TOP3A-218ENST00000584669 DOCK1Q14185 1865 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 ATRNL1Q5VV63 1379 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 BTBD19C9JJ37 291 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 GOLIM4O00461 696 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 IGSF3O75054 1194 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 BAG3O95817 575 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 MAP4K4O95819 1239 aaPredicted RBP25.23■■□□□ 1.63
TOP3A-218ENST00000584669 ATP5JP18859 108 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 MAP3K12Q12852 859 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 PTPN22Q9Y2R2 807 aa25.23■■□□□ 1.63
TOP3A-218ENST00000584669 SLURP2P0DP57 97 aa25.22■■□□□ 1.63
TOP3A-218ENST00000584669 PPP4CP60510 307 aa25.22■■□□□ 1.63
TOP3A-218ENST00000584669 DYNLL1P63167 89 aaKnown RBP25.22■■□□□ 1.63
TOP3A-218ENST00000584669 PPATQ06203 517 aa25.22■■□□□ 1.63
TOP3A-218ENST00000584669 TTF1Q15361 905 aaPredicted RBP25.22■■□□□ 1.63
TOP3A-218ENST00000584669 NPM3O75607 178 aaKnown RBP25.21■■□□□ 1.63
TOP3A-218ENST00000584669 CAP1Q01518 475 aa25.21■■□□□ 1.63
TOP3A-218ENST00000584669 EXOC6Q8TAG9 804 aa25.21■■□□□ 1.63
TOP3A-218ENST00000584669 ZNF112Q9UJU3 913 aa25.21■■□□□ 1.63
TOP3A-218ENST00000584669 PLCG2P16885 1265 aa25.2■■□□□ 1.62
TOP3A-218ENST00000584669 ARHGEF6Q15052 776 aa25.2■■□□□ 1.62
TOP3A-218ENST00000584669 MIGA1Q8NAN2 632 aa25.2■■□□□ 1.62
TOP3A-218ENST00000584669 HAUS7Q99871 368 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms