RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
ERBB2-216ENST00000584014 TCRBV5S4A2TA0A5A2 114 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 M0R2C6 588 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 PRKAB2O43741 272 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 CELF2O95319 508 aaKnown RBP10.04□□□□□ -0.8
ERBB2-216ENST00000584014 NF2P35240 595 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 GRM1Q13255 1194 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 NMIQ13287 307 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-216ENST00000584014 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 CCDC129Q6ZRS4 1044 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-216ENST00000584014 ZFPM1Q8IX07 1006 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 LCORLQ8N3X6 602 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 APPBP2Q92624 585 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 CRNKL1Q9BZJ0 848 aaKnown RBP10.04□□□□□ -0.8
ERBB2-216ENST00000584014 PGAP2Q9UHJ9 254 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 SLC4A4Q9Y6R1 1079 aa10.04□□□□□ -0.8
ERBB2-216ENST00000584014 POLR3DP05423 398 aaPredicted RBP10.03□□□□□ -0.8
ERBB2-216ENST00000584014 RHBDL3P58872 404 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 FSTL1Q12841 308 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 NBR1Q14596 966 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 NBPF12Q5TAG4 269 aaPredicted RBP10.03□□□□□ -0.8
ERBB2-216ENST00000584014 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 SDR42E1Q8WUS8 393 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 OSBP2Q969R2 916 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 DDRGK1Q96HY6 314 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
ERBB2-216ENST00000584014 FAM198AQ9UFP1 575 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 ABT1Q9ULW3 272 aaKnown RBP10.03□□□□□ -0.8
ERBB2-216ENST00000584014 PITPNM2Q9BZ72 1349 aa10.03□□□□□ -0.8
ERBB2-216ENST00000584014 A0A0D9SFI3 127 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 GPAA1O43292 621 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 WDHD1O75717 1129 aaPredicted RBP10.02□□□□□ -0.81
ERBB2-216ENST00000584014 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
ERBB2-216ENST00000584014 PPP4CP60510 307 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 C1QTNF8P60827 252 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 SUPT20HL1Q3ZLR7 823 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 CHRDL2Q6WN34 429 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 MOB2Q70IA6 237 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 CDAN1Q8IWY9 1227 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
ERBB2-216ENST00000584014 FAM151AQ8WW52 585 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 MCM9Q9NXL9 1143 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 PALD1Q9ULE6 856 aa10.02□□□□□ -0.81
ERBB2-216ENST00000584014 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 FAM196BA6NMK8 535 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 MINDY4BA8MYZ0 360 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 UBE2Q2LH0YL09 131 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 HIP1O00291 1037 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 SLURP2P0DP57 97 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 TDO2P48775 406 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 HTRA3P83110 453 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 MCMDC2Q4G0Z9 681 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 ZMYM1Q5SVZ6 1142 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 FAM83AQ86UY5 434 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 CERS3Q8IU89 383 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 AMOTL1Q8IY63 956 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 C2orf69Q8N8R5 385 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 CSRNP1Q96S65 589 aa10.01□□□□□ -0.81
ERBB2-216ENST00000584014 RIOK1Q9BRS2 568 aaKnown RBP10.01□□□□□ -0.81
ERBB2-216ENST00000584014 ANGEL1Q9UNK9 670 aaKnown RBP10.01□□□□□ -0.81
ERBB2-216ENST00000584014 DDTLA6NHG4 134 aaPredicted RBP10□□□□□ -0.81
ERBB2-216ENST00000584014 PPP1R12BO60237 982 aaPredicted RBP10□□□□□ -0.81
ERBB2-216ENST00000584014 IGSF3O75054 1194 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 ENTPD3O75355 529 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 FKBP1CQ5VVH2 108 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 TMED8Q6PL24 325 aaPredicted RBP10□□□□□ -0.81
ERBB2-216ENST00000584014 CASC1Q6TDU7 716 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 STRBPQ96SI9 672 aaKnown RBP10□□□□□ -0.81
ERBB2-216ENST00000584014 IDI2Q9BXS1 227 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 OSBPL5Q9H0X9 879 aaPredicted RBP10□□□□□ -0.81
ERBB2-216ENST00000584014 GBA2Q9HCG7 927 aaPredicted RBP10□□□□□ -0.81
ERBB2-216ENST00000584014 HELLSQ9NRZ9 838 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 FLT1P17948 1338 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 CDK5RAP2Q96SN8 1893 aa10□□□□□ -0.81
ERBB2-216ENST00000584014 MYH1P12882 1939 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 CYP2D7A0A087X1C5 515 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 HLA-DOAP06340 250 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 CYP2D6P10635 497 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 CHMLP26374 656 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 APLP1P51693 650 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 MFAP1P55081 439 aaKnown RBP9.99□□□□□ -0.81
ERBB2-216ENST00000584014 BMP2KLQ5H9B9 411 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 CST9Q5W186 159 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 SH3BP5LQ7L8J4 393 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 ARMC9Q7Z3E5 817 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 ZNF589Q86UQ0 364 aaPredicted RBP9.99□□□□□ -0.81
ERBB2-216ENST00000584014 NACAP1Q9BZK3 213 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.99□□□□□ -0.81
ERBB2-216ENST00000584014 DCP1AQ9NPI6 582 aaPredicted RBP9.99□□□□□ -0.81
ERBB2-216ENST00000584014 PPP2R3BQ9Y5P8 575 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 TRPM7Q96QT4 1865 aa9.99□□□□□ -0.81
ERBB2-216ENST00000584014 BAZ2AQ9UIF9 1905 aaKnown RBP9.99□□□□□ -0.81
ERBB2-216ENST00000584014 NAV1Q8NEY1 1877 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms