RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	DLK2	Q6UY11	383 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	CHD1L	Q86WJ1	897 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	TEPSIN	Q96N21	525 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.96	□□□□□ -0.49
NARF-222	ENST00000583908	ANTXR1	Q9H6X2	564 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	NDUFB9	Q9Y6M9	179 aa		11.96	□□□□□ -0.49
NARF-222	ENST00000583908	THSD7B	Q9C0I4	1608 aa		11.96	□□□□□ -0.5
NARF-222	ENST00000583908	SSC5D	A1L4H1	1573 aa		11.96	□□□□□ -0.5
NARF-222	ENST00000583908	UBE2Q2L	H0YL09	131 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	WDHD1	O75717	1129 aa	Predicted RBP	11.95	□□□□□ -0.5
NARF-222	ENST00000583908	ZBTB48	P10074	688 aa	Predicted RBP	11.95	□□□□□ -0.5
NARF-222	ENST00000583908	RHBDL3	P58872	404 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	UBE3C	Q15386	1083 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	B4GALNT3	Q6L9W6	998 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	RASAL3	Q86YV0	1011 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	KBTBD3	Q8NAB2	608 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.95	□□□□□ -0.5
NARF-222	ENST00000583908	ZNF384	Q8TF68	577 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	SLC10A4	Q96EP9	437 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	WRNIP1	Q96S55	665 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	FSD1	Q9BTV5	496 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	LNPK	Q9C0E8	428 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.95	□□□□□ -0.5
NARF-222	ENST00000583908	FAM198A	Q9UFP1	575 aa		11.95	□□□□□ -0.5
NARF-222	ENST00000583908	ATRNL1	Q5VV63	1379 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	FLT1	P17948	1338 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	ZNF532	Q9HCE3	1301 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	ADD2	P35612	726 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	MAP3K9	P80192	1104 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	NUCB1	Q02818	461 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	LDLRAD1	Q5T700	205 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	TICAM2	Q86XR7	235 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	MIGA1	Q8NAN2	632 aa		11.94	□□□□□ -0.5
NARF-222	ENST00000583908	HERC5	Q9UII4	1024 aa	Known RBP	11.94	□□□□□ -0.5
NARF-222	ENST00000583908	MOB2	Q70IA6	237 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	MAPKAPK5	Q8IW41	473 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.93	□□□□□ -0.5
NARF-222	ENST00000583908	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.93	□□□□□ -0.5	3e-10	■□□□□ 8.3
NARF-222	ENST00000583908	TGFBRAP1	Q8WUH2	860 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	PICK1	Q9NRD5	415 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	PI4KB	Q9UBF8	816 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	STAP2	Q9UGK3	403 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	TAOK2	Q9UL54	1235 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	CEP350	Q5VT06	3117 aa		11.93	□□□□□ -0.5
NARF-222	ENST00000583908	MANSC4	A6NHS7	340 aa	Predicted RBP	11.92	□□□□□ -0.5
NARF-222	ENST00000583908	USP2	O75604	605 aa	Predicted RBP	11.92	□□□□□ -0.5
NARF-222	ENST00000583908	GNAT2	P19087	354 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	PDE1A	P54750	535 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	INHBE	P58166	350 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	VGLL4	Q14135	290 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	TSHZ3	Q63HK5	1081 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	OTUD7B	Q6GQQ9	843 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	ADGRA1	Q86SQ6	560 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	TTC6	Q86TZ1	520 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	PI4K2B	Q8TCG2	481 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	APPBP2	Q92624	585 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	EVI5L	Q96CN4	794 aa		11.92	□□□□□ -0.5
NARF-222	ENST00000583908	EDC3	Q96F86	508 aa	Known RBP	11.92	□□□□□ -0.5
NARF-222	ENST00000583908	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
NARF-222	ENST00000583908	RNF113A	O15541	343 aa	Known RBP	11.91	□□□□□ -0.5
NARF-222	ENST00000583908	TBC1D12	O60347	775 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	IGHD	P01880	384 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	HSPA1A	P0DMV8	641 aa	Known RBP	11.91	□□□□□ -0.5
NARF-222	ENST00000583908	HSPA1B	P0DMV9	641 aa	Known RBP	11.91	□□□□□ -0.5
NARF-222	ENST00000583908	SPRYD7	Q5W111	196 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	ERO1B	Q86YB8	467 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	TBC1D2	Q9BYX2	928 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	ELP3	Q9H9T3	547 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	DDX4	Q9NQI0	724 aa	Known RBP	11.91	□□□□□ -0.5
NARF-222	ENST00000583908	ATP8A2	Q9NTI2	1148 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	AK9	Q5TCS8	1911 aa		11.91	□□□□□ -0.5
NARF-222	ENST00000583908	SALL3	Q9BXA9	1300 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	TCRBV5S4A2T	A0A5A2	114 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	SPDYE5	A6NIY4	337 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	FAM155A	B1AL88	458 aa	Predicted RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	TRIM6-TRIM34	B2RNG4	842 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	AOC2	O75106	756 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	MBD4	O95243	580 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	ALDH1A1	P00352	501 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	POLR3D	P05423	398 aa	Predicted RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	DYNLL1	P63167	89 aa	Known RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	KIF23	Q02241	960 aa	Predicted RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	NOL9	Q5SY16	702 aa	Known RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	MIGA2	Q7L4E1	593 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	CDAN1	Q8IWY9	1227 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	OPTN	Q96CV9	577 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	WNK4	Q96J92	1243 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	RIOK1	Q9BRS2	568 aa	Known RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	NACAP1	Q9BZK3	213 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	GINM1	Q9NU53	330 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	SAGE1	Q9NXZ1	904 aa		11.9	□□□□□ -0.5
NARF-222	ENST00000583908	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.9	□□□□□ -0.5
NARF-222	ENST00000583908	MYH7	P12883	1935 aa		11.9	□□□□□ -0.51
NARF-222	ENST00000583908	DDTL	A6NHG4	134 aa	Predicted RBP	11.89	□□□□□ -0.51
NARF-222	ENST00000583908	HIP1	O00291	1037 aa		11.89	□□□□□ -0.51
NARF-222	ENST00000583908	CTNND1	O60716	968 aa	Known RBP	11.89	□□□□□ -0.51
NARF-222	ENST00000583908	CTCF	P49711	727 aa	Predicted RBP	11.89	□□□□□ -0.51
NARF-222	ENST00000583908	GTF2A2	P52657	109 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms