RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 KLRK1P26718 216 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 CHRNDQ07001 517 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 UBE3BQ7Z3V4 1068 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 ERO1AQ96HE7 468 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 WNK4Q96J92 1243 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 CLMNQ96JQ2 1002 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 PRMT6Q96LA8 375 aaPredicted RBP6.82□□□□□ -1.32
VAPA-207ENST00000583879 PLA2G12BQ9BX93 195 aa6.82□□□□□ -1.32
VAPA-207ENST00000583879 SNAP23O00161 211 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 IL1R1P14778 569 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 EN2P19622 333 aaPredicted RBP6.81□□□□□ -1.32
VAPA-207ENST00000583879 KCNJ4P48050 445 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 IREB2P48200 963 aaKnown RBP6.81□□□□□ -1.32
VAPA-207ENST00000583879 CASP7P55210 303 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 FKBP1AP62942 108 aaKnown RBP6.81□□□□□ -1.32
VAPA-207ENST00000583879 SP3Q02447 781 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 PTGDRQ13258 359 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 CRHR2Q13324 411 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 GCKRQ14397 625 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 CFAP100Q494V2 611 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 NBPF12Q5TAG4 269 aaPredicted RBP6.81□□□□□ -1.32
VAPA-207ENST00000583879 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 C15orf52Q6ZUT6 534 aaKnown RBP6.81□□□□□ -1.32
VAPA-207ENST00000583879 ANKRD13AQ8IZ07 590 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 CERS5Q8N5B7 392 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 CD99L2Q8TCZ2 262 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 ARMC5Q96C12 935 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 PTPN18Q99952 460 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 STK31Q9BXU1 1019 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 SLC6A16Q9GZN6 736 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 EFCC1Q9HA90 598 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 PCDHAC2Q9Y5I4 1007 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 AKAP11Q9UKA4 1901 aa6.81□□□□□ -1.32
VAPA-207ENST00000583879 IRS2Q9Y4H2 1338 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 CLRN2A0PK11 232 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 ANKRD18BA2A2Z9 1011 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 RCCD1A6NED2 376 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 F8W031 263 aaPredicted RBP6.8□□□□□ -1.32
VAPA-207ENST00000583879 TAF5LO75529 589 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 GJA5P36382 358 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 RASA3Q14644 834 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 TREML4Q6UXN2 200 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 G2E3Q7L622 706 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
VAPA-207ENST00000583879 VEZTQ9HBM0 779 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 AAASQ9NRG9 546 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 ADGRG1Q9Y653 693 aa6.8□□□□□ -1.32
VAPA-207ENST00000583879 COL1A1P02452 1464 aaPredicted RBP6.79□□□□□ -1.32
VAPA-207ENST00000583879 ST8SIA5O15466 376 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 FXR1P51114 621 aaKnown RBP eCLIP6.79□□□□□ -1.32
VAPA-207ENST00000583879 RBM5P52756 815 aaKnown RBP eCLIP6.79□□□□□ -1.32
VAPA-207ENST00000583879 CAP1Q01518 475 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 IFIT5Q13325 482 aaKnown RBP6.79□□□□□ -1.32
VAPA-207ENST00000583879 ARHGEF6Q15052 776 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 TWISTNBQ3B726 338 aaPredicted RBP6.79□□□□□ -1.32
VAPA-207ENST00000583879 ZNF804AQ7Z570 1209 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 NBPF11Q86T75 865 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 LINS1Q8NG48 757 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 OPTNQ96CV9 577 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 MYH16Q9H6N6 1097 aa6.79□□□□□ -1.32
VAPA-207ENST00000583879 PRKRIP1Q9H875 184 aaPredicted RBP6.79□□□□□ -1.32
VAPA-207ENST00000583879 AOX1Q06278 1338 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 EIF5BO60841 1220 aaKnown RBP6.78□□□□□ -1.32
VAPA-207ENST00000583879 MLLT3P42568 568 aaPredicted RBP6.78□□□□□ -1.32
VAPA-207ENST00000583879 FOXO4P98177 505 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 FLIIQ13045 1269 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 TNFAIP1Q13829 316 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.78□□□□□ -1.32
VAPA-207ENST00000583879 DNAAF4Q8WXU2 420 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 BRI3BPQ8WY22 251 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 TSR2Q969E8 191 aaKnown RBP6.78□□□□□ -1.32
VAPA-207ENST00000583879 ZNF333Q96JL9 665 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 TDRD3Q9H7E2 651 aaKnown RBP6.78□□□□□ -1.32
VAPA-207ENST00000583879 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 ZFYVE28Q9HCC9 887 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 ZNF70Q9UC06 446 aaPredicted RBP6.78□□□□□ -1.32
VAPA-207ENST00000583879 JAG2Q9Y219 1238 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 SSC5DA1L4H1 1573 aa6.78□□□□□ -1.32
VAPA-207ENST00000583879 PDE4DIPQ5VU43 2346 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
VAPA-207ENST00000583879 SEMA3EO15041 775 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 PLIN1O60240 522 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 GTF2A2P52657 109 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 FOXC1Q12948 553 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
VAPA-207ENST00000583879 TAF1CQ15572 869 aaPredicted RBP6.77□□□□□ -1.33
VAPA-207ENST00000583879 CCDC27Q2M243 656 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 SLC4A8Q2Y0W8 1093 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 SLC9C1Q4G0N8 1177 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 PLA2G2CQ5R387 149 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 LMBR1LQ6UX01 489 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 LDHAL6AQ6ZMR3 332 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 WWC1Q8IX03 1113 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 SCUBE3Q8IX30 993 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 TDRD7Q8NHU6 1098 aaKnown RBP6.77□□□□□ -1.33
VAPA-207ENST00000583879 SERPINA10Q9UK55 444 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
VAPA-207ENST00000583879 CHMP3Q9Y3E7 222 aa6.77□□□□□ -1.33
VAPA-207ENST00000583879 PTCH2Q9Y6C5 1203 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms