RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, human

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC3-208	ENST00000583649	OGDHL	Q9ULD0	1010 aa		14.02	□□□□□ -0.17
CASC3-208	ENST00000583649	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	14.02	□□□□□ -0.17
CASC3-208	ENST00000583649	MGAM	O43451	1857 aa		14.01	□□□□□ -0.17
CASC3-208	ENST00000583649	MDM2	Q00987	491 aa	Predicted RBP	14.01	□□□□□ -0.17
CASC3-208	ENST00000583649	G2E3	Q7L622	706 aa		14.01	□□□□□ -0.17
CASC3-208	ENST00000583649	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	14.01	□□□□□ -0.17
CASC3-208	ENST00000583649	AGTPBP1	Q9UPW5	1226 aa		14.01	□□□□□ -0.17
CASC3-208	ENST00000583649	AFG3L2	Q9Y4W6	797 aa		14.01	□□□□□ -0.17
CASC3-208	ENST00000583649	GRM8	O00222	908 aa		14	□□□□□ -0.17
CASC3-208	ENST00000583649	PTPRA	P18433	802 aa		14	□□□□□ -0.17
CASC3-208	ENST00000583649	COL9A1	P20849	921 aa		14	□□□□□ -0.17
CASC3-208	ENST00000583649	METTL24	Q5JXM2	366 aa		14	□□□□□ -0.17
CASC3-208	ENST00000583649	CTNND1	O60716	968 aa	Known RBP	13.99	□□□□□ -0.17
CASC3-208	ENST00000583649	IFIT1	P09914	478 aa	Known RBP	13.99	□□□□□ -0.17
CASC3-208	ENST00000583649	GRIK5	Q16478	980 aa		13.99	□□□□□ -0.17
CASC3-208	ENST00000583649	CCAR1	Q8IX12	1150 aa	Known RBP	13.99	□□□□□ -0.17
CASC3-208	ENST00000583649	SOCS4	Q8WXH5	440 aa		13.99	□□□□□ -0.17
CASC3-208	ENST00000583649	TBC1D2	Q9BYX2	928 aa		13.99	□□□□□ -0.17
CASC3-208	ENST00000583649	TRIM75P	A6NK02	468 aa		13.98	□□□□□ -0.17
CASC3-208	ENST00000583649	PDE3A	Q14432	1141 aa		13.98	□□□□□ -0.17
CASC3-208	ENST00000583649	CDC42EP5	Q6NZY7	148 aa		13.98	□□□□□ -0.17
CASC3-208	ENST00000583649	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.98	□□□□□ -0.17
CASC3-208	ENST00000583649	CDX2	Q99626	313 aa	Predicted RBP	13.98	□□□□□ -0.17
CASC3-208	ENST00000583649	USP40	Q9NVE5	1235 aa		13.98	□□□□□ -0.17
CASC3-208	ENST00000583649	KIF16B	Q96L93	1317 aa		13.97	□□□□□ -0.17
CASC3-208	ENST00000583649	PDE8B	O95263	885 aa		13.97	□□□□□ -0.17
CASC3-208	ENST00000583649	PRKAR2A	P13861	404 aa	Known RBP	13.97	□□□□□ -0.17
CASC3-208	ENST00000583649	NUDT12	Q9BQG2	462 aa		13.97	□□□□□ -0.17
CASC3-208	ENST00000583649		A0A1B0GUL6	1792 aa		13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	TNFRSF10A	O00220	468 aa		13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	ENTPD3	O75355	529 aa		13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	XRCC5	P13010	732 aa	Known RBP	13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	FOSL2	P15408	326 aa		13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	SLF2	Q8IX21	1173 aa		13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	TSR2	Q969E8	191 aa	Known RBP	13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	GNL3L	Q9NVN8	582 aa	Known RBP	13.96	□□□□□ -0.17
CASC3-208	ENST00000583649	AK9	Q5TCS8	1911 aa		13.96	□□□□□ -0.18
CASC3-208	ENST00000583649	PFAS	O15067	1338 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	PHF20L1	A8MW92	1017 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	LDHB	P07195	334 aa	Known RBP	13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	ZKSCAN1	P17029	563 aa	Predicted RBP	13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	PUM3	Q15397	648 aa	Known RBP	13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	TJAP1	Q5JTD0	557 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	BEND3	Q5T5X7	828 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	FAM122A	Q96E09	287 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	SEMA6B	Q9H3T3	888 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	CWC22	Q9HCG8	908 aa	Known RBP	13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	DAGLA	Q9Y4D2	1042 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	ALPK3	Q96L96	1907 aa		13.95	□□□□□ -0.18
CASC3-208	ENST00000583649	ALDH1L1	O75891	902 aa		13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	COL6A1	P12109	1028 aa		13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	SLC5A1	P13866	664 aa		13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	CYP2B6	P20813	491 aa		13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	NFIA	Q12857	509 aa		13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	DDX60L	Q5H9U9	1706 aa	Known RBP	13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	ZGPAT	Q8N5A5	531 aa	Known RBP	13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	PUS3	Q9BZE2	481 aa	Known RBP	13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	GJD2	Q9UKL4	321 aa		13.94	□□□□□ -0.18
CASC3-208	ENST00000583649	MSC	O60682	206 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	IRX3	P78415	501 aa	Predicted RBP	13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	SMAD3	P84022	425 aa	Known RBP	13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	LRRC26	Q2I0M4	334 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	EPHA10	Q5JZY3	1008 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	MAP3K21	Q5TCX8	1036 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	TRIB2	Q92519	343 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	IDI2	Q9BXS1	227 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	SRCIN1	Q9C0H9	1055 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	AS3MT	Q9HBK9	375 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	FAM198A	Q9UFP1	575 aa		13.93	□□□□□ -0.18
CASC3-208	ENST00000583649	TMEM265	A0A087WTH1	108 aa		13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	MAPK4	P31152	587 aa		13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	RGS2	P41220	211 aa		13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	TRIM32	Q13049	653 aa		13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	ZNF280C	Q8ND82	737 aa		13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	GPRC5A	Q8NFJ5	357 aa		13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.92	□□□□□ -0.18
CASC3-208	ENST00000583649	COL2A1	P02458	1487 aa	Predicted RBP	13.92	□□□□□ -0.18
CASC3-208	ENST00000583649		F6X3S4	739 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	GLRX3	O76003	335 aa	Known RBP	13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	PLA2G5	P39877	138 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	RGS3	P49796	1198 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	MAP3K10	Q02779	954 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	SPP2	Q13103	211 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	DIXDC1	Q155Q3	683 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	TREML2	Q5T2D2	321 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	SLC4A10	Q6U841	1118 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	IL27	Q8NEV9	243 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	MYLIP	Q8WY64	445 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	LPIN2	Q92539	896 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	TMOD4	Q9NZQ9	345 aa		13.91	□□□□□ -0.18
CASC3-208	ENST00000583649	IL16	Q14005	1332 aa		13.9	□□□□□ -0.18
CASC3-208	ENST00000583649	CCDC27	Q2M243	656 aa		13.9	□□□□□ -0.18
CASC3-208	ENST00000583649	MFSD14C	Q5VZR4	134 aa		13.9	□□□□□ -0.18
CASC3-208	ENST00000583649	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.9	□□□□□ -0.18
CASC3-208	ENST00000583649	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CASC3-208	ENST00000583649	MORF4L1	Q9UBU8	362 aa		13.9	□□□□□ -0.18
CASC3-208	ENST00000583649	VCAN	P13611	3396 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms