RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CDK8P49336 464 aa8.93□□□□□ -0.98
SMARCE1-219ENST00000583294 AKAP4Q5JQC9 854 aa8.93□□□□□ -0.98
SMARCE1-219ENST00000583294 TINF2Q9BSI4 451 aa8.93□□□□□ -0.98
SMARCE1-219ENST00000583294 AOC2O75106 756 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 GNL2Q13823 731 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 HP1BP3Q5SSJ5 553 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 NUTM2GQ5VZR2 741 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 FAM196AQ6ZSG2 479 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 GATAD2BQ8WXI9 593 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 GPRASP2Q96D09 838 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 C8orf37Q96NL8 207 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 WDR18Q9BV38 432 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 KCNQ5Q9NR82 932 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 CACNA2D2Q9NY47 1150 aa8.92□□□□□ -0.98
SMARCE1-219ENST00000583294 SCO2A0A1W2PP80 73 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 FAM221AA4D161 298 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 CRKP46108 304 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 APOBRQ0VD83 1088 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 INPP5AQ14642 412 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 CCDC84Q86UT8 332 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 MEGF10Q96KG7 1140 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 NT5C1AQ9BXI3 368 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 RNF208Q9H0X6 261 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 CSADQ9Y600 493 aa8.91□□□□□ -0.98
SMARCE1-219ENST00000583294 DCDC2CA8MYV0 355 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 F8W735 103 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 BPNT1O95861 308 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 SLFN14P0C7P3 912 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 SEZ6Q53EL9 994 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 NKD1Q969G9 470 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 TMPRSS13Q9BYE2 586 aa8.9□□□□□ -0.98
SMARCE1-219ENST00000583294 MEGF11A6BM72 1044 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 CILPO75339 1184 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 DRD2P14416 443 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 GJA8P48165 433 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 HNRNPUQ00839 825 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 WIPI1Q5MNZ9 446 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 LRFN4Q6PJG9 635 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 C12orf40Q86WS4 652 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 C12orf50Q8NA57 414 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 ELMO3Q96BJ8 720 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 PLPPR2Q96GM1 343 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 AKTIPQ9H8T0 292 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 PPP1R9AQ9ULJ8 1098 aa8.89□□□□□ -0.99
SMARCE1-219ENST00000583294 DNAJA1P31689 397 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 RPL6Q02878 288 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 FDX2Q6P4F2 183 aa8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 TMEM130Q8N3G9 435 aa8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 CYP4F12Q9HCS2 524 aa8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 AP4E1Q9UPM8 1137 aa8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 EFR3BQ9Y2G0 817 aa8.88□□□□□ -0.99
SMARCE1-219ENST00000583294 MCM4P33991 863 aa8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 MPP2Q14168 576 aa8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 CWF19L2Q2TBE0 894 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 HDXQ7Z353 690 aa8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 SMG8Q8ND04 991 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 GINM1Q9NU53 330 aa8.87□□□□□ -0.99
SMARCE1-219ENST00000583294 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 GLB1P16278 677 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 ID3Q02535 119 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 SOX4Q06945 474 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 ZC3H12AQ5D1E8 599 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 DYMQ7RTS9 669 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 REC114Q7Z4M0 266 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 SLC43A3Q8NBI5 491 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 RASGRP4Q8TDF6 673 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 BRMS1Q9HCU9 246 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 PICK1Q9NRD5 415 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 PCDHGC5Q9Y5F6 944 aa8.86□□□□□ -0.99
SMARCE1-219ENST00000583294 PRAMEF27A3QJZ7 478 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 GFRA2O00451 464 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 TMPRSS2O15393 492 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 ADH5P11766 374 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 NASPP49321 788 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 ARID5AQ03989 594 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 PPM1JQ5JR12 505 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 SLITRK4Q8IW52 837 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 LRRC3Q9BY71 257 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 SUGCTQ9HAC7 445 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 PPP1R1BQ9UD71 204 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 SNCAIPQ9Y6H5 919 aa8.85□□□□□ -0.99
SMARCE1-219ENST00000583294 ATF4P18848 351 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 GK5Q6ZS86 529 aa8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 DZIP1LQ8IYY4 767 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 TANGO6Q9C0B7 1094 aa8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 ZFP64Q9NPA5 681 aa8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 CRIM1Q9NZV1 1036 aa8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 PRKAG2Q9UGJ0 569 aa8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 HIF3AQ9Y2N7 669 aa8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 POLR3KQ9Y2Y1 108 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-219ENST00000583294 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
SMARCE1-219ENST00000583294 TIAF1O95411 115 aa8.83□□□□□ -1
SMARCE1-219ENST00000583294 PREPP48147 710 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms