RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 MST1RQ04912 1400 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 ERLIN2O94905 339 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 CYP21A2P08686 494 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 EIF5P55010 431 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 MAGEB6Q8N7X4 407 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 ZNF579Q8NAF0 562 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 CYP27B1O15528 508 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 CD2BP2O95400 341 aaKnown RBP6.66□□□□□ -1.34
RTTN-209ENST00000583043 PROSER3Q2NL68 480 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 RPGRIP1Q96KN7 1286 aa6.66□□□□□ -1.34
RTTN-209ENST00000583043 ATP8B1O43520 1251 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 A1BGP04217 495 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 HAND2P61296 217 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 RESTQ13127 1097 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 ALS2CR12Q96Q35 445 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 NUCKS1Q9H1E3 243 aaKnown RBP6.65□□□□□ -1.34
RTTN-209ENST00000583043 ANKIB1Q9P2G1 1089 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 KRT18P05783 430 aaKnown RBP6.65□□□□□ -1.34
RTTN-209ENST00000583043 HIBADHP31937 336 aaKnown RBP6.65□□□□□ -1.34
RTTN-209ENST00000583043 AOPEPQ8N6M6 819 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 CAGE1Q8TC20 777 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 CUL5Q93034 780 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.34
RTTN-209ENST00000583043 V9GYY5 206 aaPredicted RBP6.65□□□□□ -1.34
RTTN-209ENST00000583043 ATP2B1P20020 1258 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 RFC4P35249 363 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 NOSTRINQ8IVI9 506 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 BRIP1Q9BX63 1249 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 LEMD3Q9Y2U8 911 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 NWD1Q149M9 1564 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 PNPLA7Q6ZV29 1317 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 ZNF532Q9HCE3 1301 aa6.65□□□□□ -1.34
RTTN-209ENST00000583043 ZNF202O95125 648 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 ZAP70P43403 619 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 BRINP3Q76B58 766 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 CCAR2Q8N163 923 aaKnown RBP6.65□□□□□ -1.35
RTTN-209ENST00000583043 FLAD1Q8NFF5 587 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 RRP36Q96EU6 259 aaKnown RBP6.65□□□□□ -1.35
RTTN-209ENST00000583043 FAM89AQ96GI7 184 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 CCDC94Q9BW85 323 aaPredicted RBP6.65□□□□□ -1.35
RTTN-209ENST00000583043 TSGA10Q9BZW7 698 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 LDHBP07195 334 aaKnown RBP6.65□□□□□ -1.35
RTTN-209ENST00000583043 NLRP10Q86W26 655 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.35
RTTN-209ENST00000583043 IFNL3Q8IZI9 196 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 DEF6Q9H4E7 631 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 SH3GLB2Q9NR46 395 aa6.65□□□□□ -1.35
RTTN-209ENST00000583043 FMNL1O95466 1100 aaPredicted RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 SGMS1Q86VZ5 419 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 TMTC1Q8IUR5 882 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 DIS3L2Q8IYB7 885 aaKnown RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 RRAGDQ9NQL2 400 aaPredicted RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 SLC26A4O43511 780 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 CSF1RP07333 972 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 TSPY3P0CV98 308 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 TSPY8P0CW00 308 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 SETQ01105 290 aaPredicted RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 CLUL1Q15846 466 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 UBE2Q2Q8WVN8 375 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 GSDMAQ96QA5 445 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 FGAP02671 866 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 LEKR1Q6ZMV7 388 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 KRT222Q8N1A0 295 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 CABLES1Q8TDN4 633 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 MYO1AQ9UBC5 1043 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 PPARAQ07869 468 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 GAS2L3Q86XJ1 694 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 EXOC1Q9NV70 894 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 FMN2Q9NZ56 1722 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 GADD45BO75293 160 aaPredicted RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 ARID4AP29374 1257 aaPredicted RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 STAT6P42226 847 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 NGLY1Q96IV0 654 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 AK8Q96MA6 479 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 OGFRQ9NZT2 677 aa6.64□□□□□ -1.35
RTTN-209ENST00000583043 SOS2Q07890 1332 aaPredicted RBP6.64□□□□□ -1.35
RTTN-209ENST00000583043 FAM177BA6PVY3 158 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 GUCY1B3Q02153 619 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 SCRN1Q12765 414 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 NRXN3Q9Y4C0 1643 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 TOPAZ1Q8N9V7 1692 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 SH2B2O14492 632 aaPredicted RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 N4BP3O15049 544 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 LONP1P36776 959 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 PRPHP41219 470 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 GABPB1Q06547 395 aaPredicted RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 CCDC181Q5TID7 509 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 ARL6IP4Q66PJ3 421 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 DTHD1Q6ZMT9 781 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 TTLL7Q6ZT98 887 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 KIAA1328Q86T90 577 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 LINC00301Q8NCQ3 95 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 TAF4BQ92750 862 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 XRN1Q8IZH2 1706 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 ADRA2BP18089 450 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 ATP2B4P23634 1241 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 PAFAH1B1P43034 410 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms