RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 ZMYND8Q9ULU4 1186 aaPredicted RBP10.8□□□□□ -0.68
PDLIM1P3-201ENST00000582370 TTF2Q9UNY4 1162 aaKnown RBP10.8□□□□□ -0.68
PDLIM1P3-201ENST00000582370 MYH13Q9UKX3 1938 aa10.8□□□□□ -0.68
PDLIM1P3-201ENST00000582370 DOCK2Q92608 1830 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 MFSD14BQ5SR56 506 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 DCAF15Q66K64 600 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 CRBNQ96SW2 442 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 UBE2OQ9C0C9 1292 aaKnown RBP10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 PPP4R2Q9NY27 417 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 GABRQQ9UN88 632 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 KCNH4Q9UQ05 1017 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 TTC28Q96AY4 2481 aa10.79□□□□□ -0.68
PDLIM1P3-201ENST00000582370 MAST2Q6P0Q8 1798 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 ELNP15502 786 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 CRKP46108 304 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 FLT3LGP49771 235 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 MTX1Q13505 466 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 CWF19L2Q2TBE0 894 aaKnown RBP10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 HSP90AB4PQ58FF6 505 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 C20orf194Q5TEA3 1177 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 UBE3BQ7Z3V4 1068 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 DIS3LQ8TF46 1054 aaKnown RBP10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 GUCD1Q96NT3 240 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 RWDD1Q9H446 243 aaPredicted RBP10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 JAG2Q9Y219 1238 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 FRMPD3Q5JV73 1810 aa10.78□□□□□ -0.68
PDLIM1P3-201ENST00000582370 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SNAP23O00161 211 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TAF5LO75529 589 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CSF1RP07333 972 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 HDAC1Q13547 482 aaPredicted RBP10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 FAM83AQ86UY5 434 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.69
PDLIM1P3-201ENST00000582370 DOCK1Q14185 1865 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ANKRD18BA2A2Z9 1011 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SYN1P17600 705 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 COL9A1P20849 921 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 MOGSQ13724 837 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 RABL6Q3YEC7 729 aaPredicted RBP10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 FKBP1CQ5VVH2 108 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 MEIS3Q99687 375 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ZNF341Q9BYN7 854 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TMOD2Q9NZR1 351 aa10.76□□□□□ -0.69
PDLIM1P3-201ENST00000582370 PLXNB2O15031 1838 aa10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 LTBP2Q14767 1821 aa10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TNPO2O14787 897 aaKnown RBP10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 NBPF7P0C2Y1 421 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ANKRD44Q8N8A2 993 aa10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TDRD7Q8NHU6 1098 aaKnown RBP10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CCDC136Q96JN2 1154 aa10.75□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CXCL11O14625 94 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CYP2C8P10632 490 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 INPP5BP32019 993 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CASP7P55210 303 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ATP8B2P98198 1209 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CCDC57Q2TAC2 916 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ZNF697Q5TEC3 545 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CENPQQ7L2Z9 268 aaPredicted RBP10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ERC1Q8IUD2 1116 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 C11orf49Q9H6J7 331 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
PDLIM1P3-201ENST00000582370 LOC285556D6RIA3 1793 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 HMGCRP04035 888 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CACNB3P54284 484 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 IFIT5Q13325 482 aaKnown RBP10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 GPAT2Q6NUI2 795 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 FASTKD5Q7L8L6 764 aaKnown RBP10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 MAFAQ8NHW3 353 aaPredicted RBP10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TEKT1Q969V4 418 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 COA7Q96BR5 231 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ZNF112Q9UJU3 913 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TNNQ9UQP3 1299 aa10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
PDLIM1P3-201ENST00000582370 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 PLA2G5P39877 138 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 CEP85Q6P2H3 762 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TBC1D22AQ8WUA7 517 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 ZDHHC15Q96MV8 337 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 FAM161BQ96MY7 647 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 HMX1Q9NP08 348 aaPredicted RBP10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 TAOK2Q9UL54 1235 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 MAST3O60307 1309 aa10.72□□□□□ -0.69
PDLIM1P3-201ENST00000582370 A0A0G2JLL6 359 aaPredicted RBP10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 PFASO15067 1338 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 HIBADHP31937 336 aaKnown RBP10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 IRX6P78412 446 aaPredicted RBP10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 FOXO4P98177 505 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 UBE4AQ14139 1066 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 DNAH12Q6ZR08 3092 aa10.71□□□□□ -0.69
PDLIM1P3-201ENST00000582370 MIGA2Q7L4E1 593 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms