RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TAF5LO75529 589 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 TFRCP02786 760 aaKnown RBP7.95□□□□□ -1.14
TVP23B-210ENST00000582288 CRKP46108 304 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 PRKCZQ05513 592 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 IFIT5Q13325 482 aaKnown RBP7.95□□□□□ -1.14
TVP23B-210ENST00000582288 UBE4AQ14139 1066 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 FAM109BQ6ICB4 259 aaPredicted RBP7.95□□□□□ -1.14
TVP23B-210ENST00000582288 NECAB2Q7Z6G3 386 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.95□□□□□ -1.14
TVP23B-210ENST00000582288 CCDC146Q8IYE0 955 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 TDHQ8IZJ6 230 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 C8orf58Q8NAV2 365 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
TVP23B-210ENST00000582288 ZNF341Q9BYN7 854 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 UNC93B1Q9H1C4 597 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 ZNF112Q9UJU3 913 aa7.95□□□□□ -1.14
TVP23B-210ENST00000582288 VCANP13611 3396 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 ADCY3O60266 1144 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 HIBADHP31937 336 aaKnown RBP7.94□□□□□ -1.14
TVP23B-210ENST00000582288 MOGSQ13724 837 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 NOL9Q5SY16 702 aaKnown RBP7.94□□□□□ -1.14
TVP23B-210ENST00000582288 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.94□□□□□ -1.14
TVP23B-210ENST00000582288 LINS1Q8NG48 757 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 TBC1D22AQ8WUA7 517 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 ZDHHC15Q96MV8 337 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 STK31Q9BXU1 1019 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 TMOD2Q9NZR1 351 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 SLC45A1Q9Y2W3 748 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 SUGT1Q9Y2Z0 365 aa7.94□□□□□ -1.14
TVP23B-210ENST00000582288 CUL9Q8IWT3 2517 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 SPTBN5Q9NRC6 3674 aaKnown RBP7.93□□□□□ -1.14
TVP23B-210ENST00000582288 SNAP23O00161 211 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 ELL2O00472 640 aaPredicted RBP7.93□□□□□ -1.14
TVP23B-210ENST00000582288 CXCL11O14625 94 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 INHAP05111 366 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 FLT3LGP49771 235 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 WDR43Q15061 677 aaKnown RBP eCLIP7.93□□□□□ -1.14
TVP23B-210ENST00000582288 FASTKD5Q7L8L6 764 aaKnown RBP7.93□□□□□ -1.14
TVP23B-210ENST00000582288 TEKT1Q969V4 418 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 PAWRQ96IZ0 340 aaKnown RBP7.93□□□□□ -1.14
TVP23B-210ENST00000582288 DEFB118Q96PH6 123 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 LAMA2P24043 3122 aaKnown RBP7.93□□□□□ -1.14
TVP23B-210ENST00000582288 EYSQ5T1H1 3165 aa7.93□□□□□ -1.14
TVP23B-210ENST00000582288 TK2O00142 265 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 BCAMP50895 628 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 FOXO4P98177 505 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 CCDC57Q2TAC2 916 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 GPAT2Q6NUI2 795 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 POTEEQ6S8J3 1075 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 HHIPL2Q6UWX4 724 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 LDHAL6AQ6ZMR3 332 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 Q6ZNB5 142 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 KCTD12Q96CX2 325 aaKnown RBP7.92□□□□□ -1.14
TVP23B-210ENST00000582288 FAM84BQ96KN1 310 aaPredicted RBP7.92□□□□□ -1.14
TVP23B-210ENST00000582288 NBPF3Q9H094 633 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 PRDM6Q9NQX0 595 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 GABRQQ9UN88 632 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 ADAMTS8Q9UP79 889 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 JAG2Q9Y219 1238 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 MAST3O60307 1309 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 RPTORQ8N122 1335 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 MYBBP1AQ9BQG0 1328 aaKnown RBP7.92□□□□□ -1.14
TVP23B-210ENST00000582288 MGAMO43451 1857 aa7.92□□□□□ -1.14
TVP23B-210ENST00000582288 A0A0G2JLL6 359 aaPredicted RBP7.91□□□□□ -1.14
TVP23B-210ENST00000582288 ARHGAP33O14559 1287 aa7.91□□□□□ -1.14
TVP23B-210ENST00000582288 TNPO2O14787 897 aaKnown RBP7.91□□□□□ -1.14
TVP23B-210ENST00000582288 APOBEC3HQ6NTF7 200 aaKnown RBP7.91□□□□□ -1.14
TVP23B-210ENST00000582288 Q7L0L9 218 aa7.91□□□□□ -1.14
TVP23B-210ENST00000582288 PRRT2Q7Z6L0 340 aaPredicted RBP7.91□□□□□ -1.14
TVP23B-210ENST00000582288 FBXO33Q7Z6M2 555 aa7.91□□□□□ -1.14
TVP23B-210ENST00000582288 FAM151AQ8WW52 585 aa7.91□□□□□ -1.14
TVP23B-210ENST00000582288 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.91□□□□□ -1.14
TVP23B-210ENST00000582288 CNNM1Q9NRU3 951 aa7.91□□□□□ -1.14
TVP23B-210ENST00000582288 COL2A1P02458 1487 aaPredicted RBP7.91□□□□□ -1.14
TVP23B-210ENST00000582288 MROH5Q6ZUA9 1318 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 CYP2C8P10632 490 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 ELNP15502 786 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 INPP5BP32019 993 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 MAGEA10P43363 369 aaPredicted RBP7.9□□□□□ -1.14
TVP23B-210ENST00000582288 GYG1P46976 350 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 C7orf61Q8IZ16 206 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 EFCAB3Q8N7B9 438 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 TSPYL6Q8N831 410 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 DNAAF4Q8WXU2 420 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 COA7Q96BR5 231 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 UBE2OQ9C0C9 1292 aaKnown RBP7.9□□□□□ -1.14
TVP23B-210ENST00000582288 OGDHLQ9ULD0 1010 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 PRUNE2Q8WUY3 3088 aa7.9□□□□□ -1.14
TVP23B-210ENST00000582288 ALPK3Q96L96 1907 aa7.9□□□□□ -1.15
TVP23B-210ENST00000582288 KIF16BQ96L93 1317 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 HMGCRP04035 888 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 NUDT7P0C024 238 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 CACNB3P54284 484 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 FLIIQ13045 1269 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 CAVIN4Q5BKX8 364 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 TAF7LQ5H9L4 462 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 LMBR1LQ6UX01 489 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 MIGA2Q7L4E1 593 aa7.89□□□□□ -1.15
TVP23B-210ENST00000582288 DIS3LQ8TF46 1054 aaKnown RBP7.89□□□□□ -1.15
TVP23B-210ENST00000582288 C11orf49Q9H6J7 331 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms