RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
TOP3A-212ENST00000582122 COL2A1P02458 1487 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 WDHD1O75717 1129 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 RGS3P49796 1198 aa12.59□□□□□ -0.39
TOP3A-212ENST00000582122 ZNF157P51786 506 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 PDE1AP54750 535 aa12.59□□□□□ -0.39
TOP3A-212ENST00000582122 NBPF12Q5TAG4 269 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 ZSCAN29Q8IWY8 852 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 ANKRD13AQ8IZ07 590 aa12.59□□□□□ -0.39
TOP3A-212ENST00000582122 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
TOP3A-212ENST00000582122 ANTXR1Q9H6X2 564 aa12.59□□□□□ -0.39
TOP3A-212ENST00000582122 AATFQ9NY61 560 aaKnown RBP eCLIP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 ANGEL1Q9UNK9 670 aaKnown RBP12.59□□□□□ -0.39
TOP3A-212ENST00000582122 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 MAGEB6P1A0A0J9YX57 407 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 ADD2P35612 726 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 CACNB3P54284 484 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 TCP10Q12799 353 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 LDLRAD1Q5T700 205 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 PRAMEF18Q5VWM3 479 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 PI4K2BQ8TCG2 481 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 ZNF341Q9BYN7 854 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 OSBPL3Q9H4L5 887 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 CSADQ9Y600 493 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 SALL3Q9BXA9 1300 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 DOCK2Q92608 1830 aa12.58□□□□□ -0.4
TOP3A-212ENST00000582122 RFX7Q2KHR2 1363 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 TBC1D12O60347 775 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 USP5P45974 858 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 NFIAQ12857 509 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-212ENST00000582122 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 PI4KBQ9UBF8 816 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
TOP3A-212ENST00000582122 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 SCAF8Q9UPN6 1271 aaKnown RBP12.57□□□□□ -0.4
TOP3A-212ENST00000582122 NDUFB9Q9Y6M9 179 aa12.57□□□□□ -0.4
TOP3A-212ENST00000582122 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 AOC2O75106 756 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-212ENST00000582122 HLA-DOAP06340 250 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 SLC10A3P09131 477 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 MAP3K10Q02779 954 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 PICALMQ13492 652 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 DLK2Q6UY11 383 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-212ENST00000582122 FOXP4Q8IVH2 680 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-212ENST00000582122 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-212ENST00000582122 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
TOP3A-212ENST00000582122 TCRBV5S4A2TA0A5A2 114 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
TOP3A-212ENST00000582122 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-212ENST00000582122 GNAT2P19087 354 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 INHBEP58166 350 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 TTC6Q86TZ1 520 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 MIGA1Q8NAN2 632 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.4
TOP3A-212ENST00000582122 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 APPBP2Q92624 585 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
TOP3A-212ENST00000582122 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
TOP3A-212ENST00000582122 FSD1Q9BTV5 496 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
TOP3A-212ENST00000582122 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 PRKG1Q13976 671 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 OTUD7AQ8TE49 926 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-212ENST00000582122 WRNIP1Q96S55 665 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
TOP3A-212ENST00000582122 GINM1Q9NU53 330 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 ZNF112Q9UJU3 913 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 SSC5DA1L4H1 1573 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 FLT1P17948 1338 aa12.54□□□□□ -0.4
TOP3A-212ENST00000582122 HIP1O00291 1037 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 CTNND1O60716 968 aaKnown RBP12.53□□□□□ -0.4
TOP3A-212ENST00000582122 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
TOP3A-212ENST00000582122 DGKZQ13574 1117 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 NOL9Q5SY16 702 aaKnown RBP12.53□□□□□ -0.4
TOP3A-212ENST00000582122 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 GIMAP6Q6P9H5 292 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 ERO1BQ86YB8 467 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 RASAL3Q86YV0 1011 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
TOP3A-212ENST00000582122 MYO5AQ9Y4I1 1855 aaKnown RBP12.53□□□□□ -0.4
TOP3A-212ENST00000582122 MYH7P12883 1935 aa12.52□□□□□ -0.4
TOP3A-212ENST00000582122 CASP8AP2Q9UKL3 1982 aa12.52□□□□□ -0.4
TOP3A-212ENST00000582122 DDTLA6NHG4 134 aaPredicted RBP12.52□□□□□ -0.41
TOP3A-212ENST00000582122 MANSC4A6NHS7 340 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms