RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 ZBED3Q96IU2 234 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 OSBPL3Q9H4L5 887 aa16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 NDUFB9Q9Y6M9 179 aa16.28■□□□□ 0.2
CSNK1D-220ENST00000581737 MROH7-TTC4A0A0A0MT08 1334 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 GAKO14976 1311 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 FKTNO75072 461 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 CAP1Q01518 475 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 FAM163AQ96GL9 167 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 TMOD2Q9NZR1 351 aa16.27■□□□□ 0.2
CSNK1D-220ENST00000581737 C8orf34Q49A92 452 aa16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 LDLRAD1Q5T700 205 aa16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 SPRYD7Q5W111 196 aa16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 CERS3Q8IU89 383 aa16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 APOBEC3FQ8IUX4 373 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
CSNK1D-220ENST00000581737 AK9Q5TCS8 1911 aa16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 MAP4K4O95819 1239 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 HABP4Q5JVS0 413 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
CSNK1D-220ENST00000581737 IGF2BP3O00425 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 BAG3O95817 575 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 PDE6AP16499 860 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 PLCG2P16885 1265 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 CYP7A1P22680 504 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 SREBF2Q12772 1141 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 SKAP1Q86WV1 359 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 MAGEB6Q8N7X4 407 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 EVI5LQ96CN4 794 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 ANGEL1Q9UNK9 670 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 TRIM17Q9Y577 477 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 SSC5DA1L4H1 1573 aa16.24■□□□□ 0.19
CSNK1D-220ENST00000581737 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 BTDP43251 543 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 FKBP1CQ5VVH2 108 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 OTOP1Q7RTM1 612 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 ZNF384Q8TF68 577 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
CSNK1D-220ENST00000581737 CLRN2A0PK11 232 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 ADD2P35612 726 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 TNNI2P48788 182 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 ARMC9Q7Z3E5 817 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 IFNL1Q8IU54 200 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 TDRD3Q9H7E2 651 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 VEZTQ9HBM0 779 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 ZNF70Q9UC06 446 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 PPP2R3BQ9Y5P8 575 aa16.22■□□□□ 0.19
CSNK1D-220ENST00000581737 TRIM6-TRIM34B2RNG4 842 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 NF2P35240 595 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 GJA5P36382 358 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 PPP4CP60510 307 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 UBE3CQ15386 1083 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 TTC22Q5TAA0 569 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 USP40Q9NVE5 1235 aa16.21■□□□□ 0.19
CSNK1D-220ENST00000581737 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
CSNK1D-220ENST00000581737 EN2P19622 333 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-220ENST00000581737 CDC42EP5Q6NZY7 148 aa16.2■□□□□ 0.18
CSNK1D-220ENST00000581737 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
CSNK1D-220ENST00000581737 DEFB129Q9H1M3 183 aa16.2■□□□□ 0.18
CSNK1D-220ENST00000581737 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 FAM83AQ86UY5 434 aa16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 CD99L2Q8TCZ2 262 aa16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 PTPN18Q99952 460 aa16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 AATFQ9NY61 560 aaKnown RBP eCLIP16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-220ENST00000581737 RPAP1Q9BWH6 1393 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 FOCADQ5VW36 1801 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 HIP1O00291 1037 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 CRHR2Q13324 411 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 MAP3K11Q16584 847 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 ADGRA1Q86SQ6 560 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 TEX11Q8IYF3 940 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 APPBP2Q92624 585 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 SLC10A4Q96EP9 437 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 IDI2Q9BXS1 227 aa16.18■□□□□ 0.18
CSNK1D-220ENST00000581737 PTPN22Q9Y2R2 807 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms