RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 GSTO1P78417 241 aa25.74■■□□□ 1.71
CCDC42-203ENST00000581598 TNNI3KQ59H18 835 aa25.74■■□□□ 1.71
CCDC42-203ENST00000581598 CD99L2Q8TCZ2 262 aa25.74■■□□□ 1.71
CCDC42-203ENST00000581598 NSUN4Q96CB9 384 aaKnown RBP25.74■■□□□ 1.71
CCDC42-203ENST00000581598 FPGT-TNNI3KV9GXZ4 949 aa25.74■■□□□ 1.71
CCDC42-203ENST00000581598 BTBD19C9JJ37 291 aa25.73■■□□□ 1.71
CCDC42-203ENST00000581598 RHBDL3P58872 404 aa25.73■■□□□ 1.71
CCDC42-203ENST00000581598 PI16Q6UXB8 463 aa25.73■■□□□ 1.71
CCDC42-203ENST00000581598 PHF20L1A8MW92 1017 aa25.72■■□□□ 1.71
CCDC42-203ENST00000581598 SURF6O75683 361 aaKnown RBP25.72■■□□□ 1.71
CCDC42-203ENST00000581598 SH3BP5LQ7L8J4 393 aa25.72■■□□□ 1.71
CCDC42-203ENST00000581598 C1orf115Q9H7X2 142 aa25.72■■□□□ 1.71
CCDC42-203ENST00000581598 EFCC1Q9HA90 598 aa25.72■■□□□ 1.71
CCDC42-203ENST00000581598 DDX4Q9NQI0 724 aaKnown RBP25.72■■□□□ 1.71
CCDC42-203ENST00000581598 PTPN22Q9Y2R2 807 aa25.72■■□□□ 1.71
CCDC42-203ENST00000581598 TLR2O60603 784 aa25.71■■□□□ 1.71
CCDC42-203ENST00000581598 IGSF3O75054 1194 aa25.71■■□□□ 1.71
CCDC42-203ENST00000581598 OS9Q13438 667 aaPredicted RBP25.71■■□□□ 1.71
CCDC42-203ENST00000581598 ARHGEF6Q15052 776 aa25.71■■□□□ 1.71
CCDC42-203ENST00000581598 ZNF512BQ96KM6 892 aaPredicted RBP25.71■■□□□ 1.71
CCDC42-203ENST00000581598 MAST2Q6P0Q8 1798 aa25.7■■□□□ 1.7
CCDC42-203ENST00000581598 CCDC158Q5M9N0 1113 aa25.7■■□□□ 1.7
CCDC42-203ENST00000581598 TBC1D9Q6ZT07 1266 aa25.7■■□□□ 1.7
CCDC42-203ENST00000581598 ANKRD23Q86SG2 305 aa25.7■■□□□ 1.7
CCDC42-203ENST00000581598 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.7■■□□□ 1.7
CCDC42-203ENST00000581598 COL2A1P02458 1487 aaPredicted RBP25.7■■□□□ 1.7
CCDC42-203ENST00000581598 DDTLA6NHG4 134 aaPredicted RBP25.69■■□□□ 1.7
CCDC42-203ENST00000581598 CAP1Q01518 475 aa25.69■■□□□ 1.7
CCDC42-203ENST00000581598 ZSCAN29Q8IWY8 852 aaPredicted RBP25.69■■□□□ 1.7
CCDC42-203ENST00000581598 SCYL3Q8IZE3 742 aa25.69■■□□□ 1.7
CCDC42-203ENST00000581598 DBNDD2Q9BQY9 259 aa25.69■■□□□ 1.7
CCDC42-203ENST00000581598 RAI14Q9P0K7 980 aa25.69■■□□□ 1.7
CCDC42-203ENST00000581598 DOCK1Q14185 1865 aa25.68■■□□□ 1.7
CCDC42-203ENST00000581598 CXCL11O14625 94 aa25.68■■□□□ 1.7
CCDC42-203ENST00000581598 TBC1D12O60347 775 aa25.68■■□□□ 1.7
CCDC42-203ENST00000581598 TTC39AQ5SRH9 613 aa25.68■■□□□ 1.7
CCDC42-203ENST00000581598 PDE4DIPQ5VU43 2346 aa25.68■■□□□ 1.7
CCDC42-203ENST00000581598 MS4A1P11836 297 aa25.67■■□□□ 1.7
CCDC42-203ENST00000581598 PICALMQ13492 652 aa25.67■■□□□ 1.7
CCDC42-203ENST00000581598 MOGSQ13724 837 aa25.67■■□□□ 1.7
CCDC42-203ENST00000581598 CEP85Q6P2H3 762 aa25.67■■□□□ 1.7
CCDC42-203ENST00000581598 LRP2BPQ9P2M1 347 aa25.67■■□□□ 1.7
CCDC42-203ENST00000581598 RBBP6Q7Z6E9 1792 aaKnown RBP25.66■■□□□ 1.7
CCDC42-203ENST00000581598 PHIPQ8WWQ0 1821 aa25.65■■□□□ 1.7
CCDC42-203ENST00000581598 CTNND1O60716 968 aaKnown RBP25.65■■□□□ 1.7
CCDC42-203ENST00000581598 ARMC5Q96C12 935 aa25.65■■□□□ 1.7
CCDC42-203ENST00000581598 PICK1Q9NRD5 415 aa25.65■■□□□ 1.7
CCDC42-203ENST00000581598 PTPRFP10586 1907 aa25.65■■□□□ 1.7
CCDC42-203ENST00000581598 PTPRAP18433 802 aa25.64■■□□□ 1.7
CCDC42-203ENST00000581598 C17orf99Q6UX52 265 aa25.64■■□□□ 1.7
CCDC42-203ENST00000581598 PANK1Q8TE04 598 aa25.64■■□□□ 1.7
CCDC42-203ENST00000581598 DBNLQ9UJU6 430 aaKnown RBP25.64■■□□□ 1.7
CCDC42-203ENST00000581598 MYO5AQ9Y4I1 1855 aaKnown RBP25.64■■□□□ 1.69
CCDC42-203ENST00000581598 PDHXO00330 501 aa25.63■■□□□ 1.69
CCDC42-203ENST00000581598 GNRH1P01148 92 aa25.63■■□□□ 1.69
CCDC42-203ENST00000581598 CYP2E1P05181 493 aaPredicted RBP25.63■■□□□ 1.69
CCDC42-203ENST00000581598 LACTBP83111 547 aaPredicted RBP25.63■■□□□ 1.69
CCDC42-203ENST00000581598 OSBPL5Q9H0X9 879 aaPredicted RBP25.63■■□□□ 1.69
CCDC42-203ENST00000581598 SNRKQ9NRH2 765 aa25.63■■□□□ 1.69
CCDC42-203ENST00000581598 ADGRA2Q96PE1 1338 aa25.63■■□□□ 1.69
CCDC42-203ENST00000581598 CENPBP07199 599 aaPredicted RBP25.62■■□□□ 1.69
CCDC42-203ENST00000581598 PPP4CP60510 307 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 KIF22Q14807 665 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 NAA16Q6N069 864 aaPredicted RBP25.62■■□□□ 1.69
CCDC42-203ENST00000581598 ERC1Q8IUD2 1116 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 EAF2Q96CJ1 260 aaPredicted RBP25.62■■□□□ 1.69
CCDC42-203ENST00000581598 NOL10Q9BSC4 688 aaKnown RBP25.62■■□□□ 1.69
CCDC42-203ENST00000581598 AFG3L2Q9Y4W6 797 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 ZHX2Q9Y6X8 837 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 FOCADQ5VW36 1801 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 CDK5RAP2Q96SN8 1893 aa25.62■■□□□ 1.69
CCDC42-203ENST00000581598 A0A0G2JLL6 359 aaPredicted RBP25.61■■□□□ 1.69
CCDC42-203ENST00000581598 BAG3O95817 575 aa25.61■■□□□ 1.69
CCDC42-203ENST00000581598 PLCG2P16885 1265 aa25.61■■□□□ 1.69
CCDC42-203ENST00000581598 FASTKD5Q7L8L6 764 aaKnown RBP25.61■■□□□ 1.69
CCDC42-203ENST00000581598 PRRT2Q7Z6L0 340 aaPredicted RBP25.61■■□□□ 1.69
CCDC42-203ENST00000581598 TEX11Q8IYF3 940 aa25.61■■□□□ 1.69
CCDC42-203ENST00000581598 HTTP42858 3142 aa25.61■■□□□ 1.69
CCDC42-203ENST00000581598 GPAT2Q6NUI2 795 aa25.6■■□□□ 1.69
CCDC42-203ENST00000581598 ZSWIM8A7E2V4 1837 aa25.6■■□□□ 1.69
CCDC42-203ENST00000581598 KIAA0100Q14667 2235 aaKnown RBP25.59■■□□□ 1.69
CCDC42-203ENST00000581598 SLURP2P0DP57 97 aa25.59■■□□□ 1.69
CCDC42-203ENST00000581598 ZAP70P43403 619 aa25.59■■□□□ 1.69
CCDC42-203ENST00000581598 PRMT2P55345 433 aa25.59■■□□□ 1.69
CCDC42-203ENST00000581598 HSP90AB4PQ58FF6 505 aa25.59■■□□□ 1.69
CCDC42-203ENST00000581598 SH3RF3Q8TEJ3 882 aaPredicted RBP25.59■■□□□ 1.69
CCDC42-203ENST00000581598 PARK7Q99497 189 aaKnown RBP25.59■■□□□ 1.69
CCDC42-203ENST00000581598 CCDC8Q9H0W5 538 aaPredicted RBP25.59■■□□□ 1.69
CCDC42-203ENST00000581598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.59■■□□□ 1.69
CCDC42-203ENST00000581598 TLR7Q9NYK1 1049 aaKnown RBP25.59■■□□□ 1.69
CCDC42-203ENST00000581598 SLC45A1Q9Y2W3 748 aa25.59■■□□□ 1.69
CCDC42-203ENST00000581598 ATAD5Q96QE3 1844 aa25.58■■□□□ 1.69
CCDC42-203ENST00000581598 DHX36Q9H2U1 1008 aaKnown RBP25.58■■□□□ 1.69
CCDC42-203ENST00000581598 AATFQ9NY61 560 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCDC42-203ENST00000581598 HERC5Q9UII4 1024 aaKnown RBP25.58■■□□□ 1.69
CCDC42-203ENST00000581598 PTCH2Q9Y6C5 1203 aa25.58■■□□□ 1.69
CCDC42-203ENST00000581598 SIPA1L1O43166 1804 aa25.58■■□□□ 1.68
CCDC42-203ENST00000581598 RPAP2Q8IXW5 612 aaPredicted RBP25.57■■□□□ 1.68
CCDC42-203ENST00000581598 TBC1D2Q9BYX2 928 aa25.57■■□□□ 1.68
CCDC42-203ENST00000581598 ARHGAP39Q9C0H5 1083 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms