RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 PLAGL2Q9UPG8 496 aa7.57□□□□□ -1.2
TTC39C-207ENST00000581394 EIF1AYO14602 144 aaKnown RBP7.56□□□□□ -1.2
TTC39C-207ENST00000581394 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
TTC39C-207ENST00000581394 IGHA2P01877 340 aa7.56□□□□□ -1.2
TTC39C-207ENST00000581394 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
TTC39C-207ENST00000581394 B4GALNT3Q6L9W6 998 aa7.56□□□□□ -1.2
TTC39C-207ENST00000581394 SLC23A3Q6PIS1 610 aa7.56□□□□□ -1.2
TTC39C-207ENST00000581394 PDZD3Q86UT5 571 aa7.56□□□□□ -1.2
TTC39C-207ENST00000581394 KSR1Q8IVT5 923 aa7.56□□□□□ -1.2
TTC39C-207ENST00000581394 TNKS2Q9H2K2 1166 aa7.56□□□□□ -1.2
TTC39C-207ENST00000581394 GADD45BO75293 160 aaPredicted RBP7.55□□□□□ -1.2
TTC39C-207ENST00000581394 HCLS1P14317 486 aaPredicted RBP7.55□□□□□ -1.2
TTC39C-207ENST00000581394 GRM2Q14416 872 aa7.55□□□□□ -1.2
TTC39C-207ENST00000581394 ARHGAP27Q6ZUM4 889 aa7.55□□□□□ -1.2
TTC39C-207ENST00000581394 FLAD1Q8NFF5 587 aa7.55□□□□□ -1.2
TTC39C-207ENST00000581394 SNX11Q9Y5W9 270 aa7.55□□□□□ -1.2
TTC39C-207ENST00000581394 NEFMP07197 916 aa7.54□□□□□ -1.2
TTC39C-207ENST00000581394 SERPINB4P48594 390 aa7.54□□□□□ -1.2
TTC39C-207ENST00000581394 MESP2Q0VG99 397 aa7.54□□□□□ -1.2
TTC39C-207ENST00000581394 BHLHE22Q8NFJ8 381 aaPredicted RBP7.54□□□□□ -1.2
TTC39C-207ENST00000581394 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
TTC39C-207ENST00000581394 GPR182O15218 404 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 PPP2R3AQ06190 1150 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 TOP6BLQ8N6T0 577 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 ISL2Q96A47 359 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 SLC38A3Q99624 504 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 TMEM39AQ9NV64 488 aa7.53□□□□□ -1.2
TTC39C-207ENST00000581394 ERVK-24P63145 666 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 ZC3H12AQ5D1E8 599 aaKnown RBP7.52□□□□□ -1.21
TTC39C-207ENST00000581394 DTHD1Q6ZMT9 781 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 FAM214BQ7L5A3 538 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 RNF214Q8ND24 703 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 KCNB2Q92953 911 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 FAM84AQ96KN4 292 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 NIF3L1Q9GZT8 377 aa7.52□□□□□ -1.21
TTC39C-207ENST00000581394 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
TTC39C-207ENST00000581394 XRCC5P13010 732 aaKnown RBP7.51□□□□□ -1.21
TTC39C-207ENST00000581394 ZSWIM9Q86XI8 627 aa7.51□□□□□ -1.21
TTC39C-207ENST00000581394 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.51□□□□□ -1.21
TTC39C-207ENST00000581394 ASB11Q8WXH4 323 aa7.51□□□□□ -1.21
TTC39C-207ENST00000581394 ALKBH8Q96BT7 664 aaKnown RBP7.51□□□□□ -1.21
TTC39C-207ENST00000581394 HEXIM2Q96MH2 286 aaKnown RBP7.51□□□□□ -1.21
TTC39C-207ENST00000581394 CSRNP1Q96S65 589 aa7.51□□□□□ -1.21
TTC39C-207ENST00000581394 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
TTC39C-207ENST00000581394 ITIH2P19823 946 aa7.5□□□□□ -1.21
TTC39C-207ENST00000581394 SULF2Q8IWU5 870 aa7.5□□□□□ -1.21
TTC39C-207ENST00000581394 EPS8L3Q8TE67 593 aaKnown RBP7.5□□□□□ -1.21
TTC39C-207ENST00000581394 KRTAP4-2Q9BYR5 136 aa7.5□□□□□ -1.21
TTC39C-207ENST00000581394 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
TTC39C-207ENST00000581394 FAM53CQ9NYF3 392 aa7.5□□□□□ -1.21
TTC39C-207ENST00000581394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
TTC39C-207ENST00000581394 LRRC10BA6NIK2 292 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 ARNTP27540 789 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 FCGRTP55899 365 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 CILP2Q8IUL8 1156 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 DMRTB1Q96MA1 342 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 PPP4R2Q9NY27 417 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 CACNA2D2Q9NY47 1150 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
TTC39C-207ENST00000581394 ZNF503-AS2A6NEH8 195 aa7.48□□□□□ -1.21
TTC39C-207ENST00000581394 SPACA3Q8IXA5 215 aa7.48□□□□□ -1.21
TTC39C-207ENST00000581394 EMILIN2Q9BXX0 1053 aa7.48□□□□□ -1.21
TTC39C-207ENST00000581394 NME2P22392 152 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 ZNF252P-AS1Q0IIN9 211 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 TMC1Q8TDI8 760 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 RBCK1Q9BYM8 510 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 PRDM10Q9NQV6 1147 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 PRDM7Q9NQW5 492 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 CTNND2Q9UQB3 1225 aa7.47□□□□□ -1.21
TTC39C-207ENST00000581394 ZP2Q05996 745 aa7.46□□□□□ -1.22
TTC39C-207ENST00000581394 IKZF1Q13422 519 aa7.46□□□□□ -1.22
TTC39C-207ENST00000581394 MAP1SQ66K74 1059 aaPredicted RBP7.46□□□□□ -1.22
TTC39C-207ENST00000581394 GPBAR1Q8TDU6 330 aa7.46□□□□□ -1.22
TTC39C-207ENST00000581394 C1orf115Q9H7X2 142 aa7.46□□□□□ -1.22
TTC39C-207ENST00000581394 NLRP2Q9NX02 1062 aa7.46□□□□□ -1.22
TTC39C-207ENST00000581394 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.45□□□□□ -1.22
TTC39C-207ENST00000581394 NTF4P34130 210 aa7.45□□□□□ -1.22
TTC39C-207ENST00000581394 MLANAQ16655 118 aa7.45□□□□□ -1.22
TTC39C-207ENST00000581394 NKPD1Q17RQ9 610 aa7.45□□□□□ -1.22
TTC39C-207ENST00000581394 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
TTC39C-207ENST00000581394 BCO2Q9BYV7 579 aa7.45□□□□□ -1.22
TTC39C-207ENST00000581394 AFMP43652 599 aa7.44□□□□□ -1.22
TTC39C-207ENST00000581394 CLCN7P51798 805 aa7.44□□□□□ -1.22
TTC39C-207ENST00000581394 RING1Q06587 406 aa7.44□□□□□ -1.22
TTC39C-207ENST00000581394 PI16Q6UXB8 463 aa7.44□□□□□ -1.22
TTC39C-207ENST00000581394 LMCD1Q9NZU5 365 aa7.44□□□□□ -1.22
TTC39C-207ENST00000581394 PITPNM2Q9BZ72 1349 aa7.44□□□□□ -1.22
TTC39C-207ENST00000581394 TSPAN15O95858 294 aa7.43□□□□□ -1.22
TTC39C-207ENST00000581394 TOX2Q96NM4 488 aa7.43□□□□□ -1.22
TTC39C-207ENST00000581394 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
TTC39C-207ENST00000581394 KRTAP9-7A8MTY7 169 aa7.42□□□□□ -1.22
TTC39C-207ENST00000581394 FANCGO15287 622 aa7.42□□□□□ -1.22
TTC39C-207ENST00000581394 EOMESO95936 686 aa7.42□□□□□ -1.22
TTC39C-207ENST00000581394 RAP1GAPP47736 663 aa7.42□□□□□ -1.22
TTC39C-207ENST00000581394 PPM1JQ5JR12 505 aa7.42□□□□□ -1.22
TTC39C-207ENST00000581394 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
TTC39C-207ENST00000581394 NECAB3Q96P71 396 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms