RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 IGF2BP3O00425 579 aaKnown RBP eCLIP32.77■■■□□ 2.84
LINC00271-207ENST00000580741 ADGRA1Q86SQ6 560 aa32.77■■■□□ 2.84
LINC00271-207ENST00000580741 ANTXR1Q9H6X2 564 aa32.77■■■□□ 2.84
LINC00271-207ENST00000580741 MAST2Q6P0Q8 1798 aa32.77■■■□□ 2.84
LINC00271-207ENST00000580741 MYO5AQ9Y4I1 1855 aaKnown RBP32.76■■■□□ 2.84
LINC00271-207ENST00000580741 ATRNL1Q5VV63 1379 aa32.76■■■□□ 2.83
LINC00271-207ENST00000580741 DDTLA6NHG4 134 aaPredicted RBP32.76■■■□□ 2.83
LINC00271-207ENST00000580741 IFIT2P09913 472 aaKnown RBP32.76■■■□□ 2.83
LINC00271-207ENST00000580741 SLURP2P0DP57 97 aa32.76■■■□□ 2.83
LINC00271-207ENST00000580741 IFNL1Q8IU54 200 aa32.76■■■□□ 2.83
LINC00271-207ENST00000580741 AATFQ9NY61 560 aaKnown RBP eCLIP32.76■■■□□ 2.83
LINC00271-207ENST00000580741 SPDYE5A6NIY4 337 aa32.75■■■□□ 2.83
LINC00271-207ENST00000580741 IDH1O75874 414 aaKnown RBP32.75■■■□□ 2.83
LINC00271-207ENST00000580741 TEX11Q8IYF3 940 aa32.75■■■□□ 2.83
LINC00271-207ENST00000580741 SH3RF3Q8TEJ3 882 aaPredicted RBP32.75■■■□□ 2.83
LINC00271-207ENST00000580741 R3HDMLQ9H3Y0 253 aa32.75■■■□□ 2.83
LINC00271-207ENST00000580741 INHBEP58166 350 aa32.74■■■□□ 2.83
LINC00271-207ENST00000580741 NOL10Q9BSC4 688 aaKnown RBP32.74■■■□□ 2.83
LINC00271-207ENST00000580741 ZNF112Q9UJU3 913 aa32.74■■■□□ 2.83
LINC00271-207ENST00000580741 MS4A4AQ96JQ5 239 aa32.73■■■□□ 2.83
LINC00271-207ENST00000580741 DOCK2Q92608 1830 aa32.72■■■□□ 2.83
LINC00271-207ENST00000580741 ERO1BQ86YB8 467 aa32.72■■■□□ 2.83
LINC00271-207ENST00000580741 PTPN18Q99952 460 aa32.72■■■□□ 2.83
LINC00271-207ENST00000580741 SMARCA5O60264 1052 aaPredicted RBP32.71■■■□□ 2.83
LINC00271-207ENST00000580741 CYP7A1P22680 504 aa32.71■■■□□ 2.83
LINC00271-207ENST00000580741 BRI3BPQ8WY22 251 aa32.71■■■□□ 2.83
LINC00271-207ENST00000580741 LAMB1P07942 1786 aa32.7■■■□□ 2.83
LINC00271-207ENST00000580741 BAG3O95817 575 aa32.7■■■□□ 2.83
LINC00271-207ENST00000580741 MAP4K4O95819 1239 aaPredicted RBP32.7■■■□□ 2.83
LINC00271-207ENST00000580741 CCL15-CCL14A0A0B4J2E2 113 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 TESPA1A2RU30 521 aaPredicted RBP32.69■■■□□ 2.82
LINC00271-207ENST00000580741 ALDH1A1P00352 501 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 DGKZQ13574 1117 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 CCL15Q16663 113 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 MAGEB6Q8N7X4 407 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 ZNF296Q8WUU4 475 aaPredicted RBP32.69■■■□□ 2.82
LINC00271-207ENST00000580741 DNAJC2Q99543 621 aaKnown RBP32.69■■■□□ 2.82
LINC00271-207ENST00000580741 LRRCC1Q9C099 1032 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 MCOLN1Q9GZU1 580 aa32.69■■■□□ 2.82
LINC00271-207ENST00000580741 OSBPL5Q9H0X9 879 aaPredicted RBP32.69■■■□□ 2.82
LINC00271-207ENST00000580741 GPR25O00155 361 aa32.68■■■□□ 2.82
LINC00271-207ENST00000580741 IRF6O14896 467 aa32.68■■■□□ 2.82
LINC00271-207ENST00000580741 NPM3O75607 178 aaKnown RBP32.68■■■□□ 2.82
LINC00271-207ENST00000580741 GTF2A2P52657 109 aa32.68■■■□□ 2.82
LINC00271-207ENST00000580741 PPP4CP60510 307 aa32.68■■■□□ 2.82
LINC00271-207ENST00000580741 DYNLL1P63167 89 aaKnown RBP32.68■■■□□ 2.82
LINC00271-207ENST00000580741 CRBNQ96SW2 442 aa32.68■■■□□ 2.82
LINC00271-207ENST00000580741 PCDHB15Q9Y5E8 787 aa32.68■■■□□ 2.82
LINC00271-207ENST00000580741 PHF20L1A8MW92 1017 aa32.67■■■□□ 2.82
LINC00271-207ENST00000580741 PPIL2Q13356 520 aa32.67■■■□□ 2.82
LINC00271-207ENST00000580741 ABHD8Q96I13 439 aa32.67■■■□□ 2.82
LINC00271-207ENST00000580741 CFHR5Q9BXR6 569 aa32.67■■■□□ 2.82
LINC00271-207ENST00000580741 FAM196BA6NMK8 535 aa32.66■■■□□ 2.82
LINC00271-207ENST00000580741 MAP3K12Q12852 859 aa32.66■■■□□ 2.82
LINC00271-207ENST00000580741 NOL9Q5SY16 702 aaKnown RBP32.66■■■□□ 2.82
LINC00271-207ENST00000580741 OTUD7BQ6GQQ9 843 aa32.66■■■□□ 2.82
LINC00271-207ENST00000580741 MAPKAPK5Q8IW41 473 aa32.66■■■□□ 2.82
LINC00271-207ENST00000580741 MIGA1Q8NAN2 632 aa32.66■■■□□ 2.82
LINC00271-207ENST00000580741 TGFBRAP1Q8WUH2 860 aa32.66■■■□□ 2.82
LINC00271-207ENST00000580741 EDC3Q96F86 508 aaKnown RBP32.66■■■□□ 2.82
LINC00271-207ENST00000580741 GOLIM4O00461 696 aa32.65■■■□□ 2.82
LINC00271-207ENST00000580741 IGSF3O75054 1194 aa32.65■■■□□ 2.82
LINC00271-207ENST00000580741 PLCG2P16885 1265 aa32.65■■■□□ 2.82
LINC00271-207ENST00000580741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.65■■■□□ 2.82
LINC00271-207ENST00000580741 DCTPP1Q9H773 170 aa32.65■■■□□ 2.82
LINC00271-207ENST00000580741 MAP3K10Q02779 954 aa32.64■■■□□ 2.82
LINC00271-207ENST00000580741 PPATQ06203 517 aa32.64■■■□□ 2.82
LINC00271-207ENST00000580741 BOLA2Q9H3K6 86 aa32.64■■■□□ 2.82
LINC00271-207ENST00000580741 CRHR2Q13324 411 aa32.63■■■□□ 2.81
LINC00271-207ENST00000580741 FAM43AQ8N2R8 423 aa32.63■■■□□ 2.81
LINC00271-207ENST00000580741 COL2A1P02458 1487 aaPredicted RBP32.62■■■□□ 2.81
LINC00271-207ENST00000580741 FLT1P17948 1338 aa32.62■■■□□ 2.81
LINC00271-207ENST00000580741 SNAPC2Q13487 334 aa32.62■■■□□ 2.81
LINC00271-207ENST00000580741 TTF1Q15361 905 aaPredicted RBP32.62■■■□□ 2.81
LINC00271-207ENST00000580741 SCYL3Q8IZE3 742 aa32.62■■■□□ 2.81
LINC00271-207ENST00000580741 CETPP11597 493 aa32.61■■■□□ 2.81
LINC00271-207ENST00000580741 NOM1Q5C9Z4 860 aaKnown RBP32.61■■■□□ 2.81
LINC00271-207ENST00000580741 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.61■■■□□ 2.81
LINC00271-207ENST00000580741 FKTNO75072 461 aa32.6■■■□□ 2.81
LINC00271-207ENST00000580741 ATP5JP18859 108 aa32.6■■■□□ 2.81
LINC00271-207ENST00000580741 CTU1Q7Z7A3 348 aaKnown RBP32.6■■■□□ 2.81
LINC00271-207ENST00000580741 PICK1Q9NRD5 415 aa32.6■■■□□ 2.81
LINC00271-207ENST00000580741 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.6■■■□□ 2.81
LINC00271-207ENST00000580741 TBC1D12O60347 775 aa32.59■■■□□ 2.81
LINC00271-207ENST00000580741 SAP30BPQ9UHR5 308 aaKnown RBP32.59■■■□□ 2.81
LINC00271-207ENST00000580741 BTBD19C9JJ37 291 aa32.58■■■□□ 2.81
LINC00271-207ENST00000580741 PDE6AP16499 860 aa32.58■■■□□ 2.81
LINC00271-207ENST00000580741 TAF1CQ15572 869 aaPredicted RBP32.58■■■□□ 2.81
LINC00271-207ENST00000580741 SLC9C2Q5TAH2 1124 aa32.58■■■□□ 2.81
LINC00271-207ENST00000580741 PAG1Q9NWQ8 432 aa32.58■■■□□ 2.81
LINC00271-207ENST00000580741 CDK5RAP2Q96SN8 1893 aa32.58■■■□□ 2.81
LINC00271-207ENST00000580741 SLC4A8Q2Y0W8 1093 aa32.57■■■□□ 2.8
LINC00271-207ENST00000580741 CCDC84Q86UT8 332 aaPredicted RBP32.57■■■□□ 2.8
LINC00271-207ENST00000580741 PALD1Q9ULE6 856 aa32.57■■■□□ 2.8
LINC00271-207ENST00000580741 KCNH4Q9UQ05 1017 aa32.57■■■□□ 2.8
LINC00271-207ENST00000580741 CTNND1O60716 968 aaKnown RBP32.56■■■□□ 2.8
LINC00271-207ENST00000580741 PTPRAP18433 802 aa32.56■■■□□ 2.8
LINC00271-207ENST00000580741 HAUS7Q99871 368 aa32.56■■■□□ 2.8
LINC00271-207ENST00000580741 ZHX2Q9Y6X8 837 aa32.56■■■□□ 2.8
LINC00271-207ENST00000580741 ZNF532Q9HCE3 1301 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms