RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 USP17L21D6R901 530 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 BTDP43251 543 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 FGD1P98174 961 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 DALRD3Q5D0E6 543 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 DHX32Q7L7V1 743 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PODNQ7Z5L7 613 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ARID3AQ99856 593 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NACAP1Q9BZK3 213 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TOMM22Q9NS69 142 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SMC3Q9UQE7 1217 aa14.95□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PRDM1O75626 825 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RAD17O75943 681 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 GNAT2P19087 354 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 GLIPR1L2Q4G1C9 344 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RAB11FIP4Q86YS3 637 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TGFBRAP1Q8WUH2 860 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 DCP1AQ9NPI6 582 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 USP17L8P0C7I0 530 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NASPP49321 788 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ANTXR2P58335 489 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 EXOSC10Q01780 885 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ST3GAL1Q11201 340 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ALX1Q15699 326 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CYB5R4Q7L1T6 521 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 LARGE2Q8N3Y3 721 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TBC1D22AQ8WUA7 517 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TMEM63CQ9P1W3 806 aa14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-217ENST00000580287 MROH7-TTC4A0A0A0MT08 1334 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ESPNB1AK53 854 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 APOBRQ0VD83 1088 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CTR9Q6PD62 1173 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 MAPKAPK5Q8IW41 473 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NAP1L2Q9ULW6 460 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RTKN2Q8IZC4 609 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ZKSCAN3Q9BRR0 538 aa14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SAP30BPQ9UHR5 308 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ISY1Q9ULR0 285 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SYCE3A1L190 88 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PPARAQ07869 468 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 HSP90AA2PQ14568 343 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 DACT2Q5SW24 774 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 MB21D2Q8IYB1 491 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RBSNQ9H1K0 784 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SENP2Q9HC62 589 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 MCM9Q9NXL9 1143 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 DAGLAQ9Y4D2 1042 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PRC1O43663 620 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RRP9O43818 475 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 USP5P45974 858 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RALYLQ86SE5 291 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NCOA7Q8NI08 942 aa14.92□□□□□ -0.02
CDK5RAP3-217ENST00000580287 KDM4AO75164 1064 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 GSTO1P78417 241 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RNF214Q8ND24 703 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 COL4A5P29400 1685 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 GPR75-ASB3A0A0A6YYF3 556 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 USP17L3A6NCW0 530 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 USP17L4A6NCW7 530 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 GADD45BO75293 160 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CACNB3P54284 484 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RHBDL3P58872 404 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 AKNAD1Q5T1N1 836 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 USP17L1Q7RTZ2 530 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ZSWIM5Q9P217 1185 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 CD2APQ9Y5K6 639 aa14.91□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NFKBIEO00221 500 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 BAG3O95817 575 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 LDHCP07864 332 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TRDNQ13061 729 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PICALMQ13492 652 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 STRIP1Q5VSL9 837 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 MFSD6Q6ZSS7 791 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TRIM44Q96DX7 344 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 DYNLL2Q96FJ2 89 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SLURP2P0DP57 97 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 GJB2P29033 226 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.029e-32■■■■□ 20.3
CDK5RAP3-217ENST00000580287 CCT2P78371 535 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 RASSF7Q02833 373 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 TEX11Q8IYF3 940 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 ZSCAN31Q96LW9 406 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 PSMD1Q99460 953 aa14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-217ENST00000580287 SCN9AQ15858 1988 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SYT1P21579 422 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 MCM5P33992 734 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 PLCD1P51178 756 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 PPP4CP60510 307 aa14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 NOL10Q9BSC4 688 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 FHDC1Q9C0D6 1143 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-217ENST00000580287 SH2B1Q9NRF2 756 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms