RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 PTPRFP10586 1907 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 AK9Q5TCS8 1911 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 UTYO14607 1347 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
BRIP1-204ENST00000579028 TCP10Q12799 353 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 LRIT3Q3SXY7 679 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 RABL6Q3YEC7 729 aaPredicted RBP10.96□□□□□ -0.65
BRIP1-204ENST00000579028 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 METTL24Q5JXM2 366 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 NECAB2Q7Z6G3 386 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 DEFB123Q8N688 67 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 SP7Q8TDD2 431 aaPredicted RBP10.96□□□□□ -0.65
BRIP1-204ENST00000579028 DAGLAQ9Y4D2 1042 aa10.96□□□□□ -0.65
BRIP1-204ENST00000579028 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.66
BRIP1-204ENST00000579028 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 FGFR2P21802 821 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 NFIAQ12857 509 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 CDC42EP5Q6NZY7 148 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 WDR66Q8TBY9 1149 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 DIS3LQ8TF46 1054 aaKnown RBP10.95□□□□□ -0.66
BRIP1-204ENST00000579028 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 FAM198AQ9UFP1 575 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
BRIP1-204ENST00000579028 IFIT1P09914 478 aaKnown RBP10.94□□□□□ -0.66
BRIP1-204ENST00000579028 NBPF7P0C2Y1 421 aaPredicted RBP10.94□□□□□ -0.66
BRIP1-204ENST00000579028 PTPRAP18433 802 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 EXOSC9Q06265 439 aaKnown RBP10.94□□□□□ -0.66
BRIP1-204ENST00000579028 Q7L0L9 218 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 C7orf61Q8IZ16 206 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 SCYL3Q8IZE3 742 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.94□□□□□ -0.66
BRIP1-204ENST00000579028 BICC1Q9H694 974 aaKnown RBP10.94□□□□□ -0.66
BRIP1-204ENST00000579028 MTMR10Q9NXD2 777 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 AFG3L2Q9Y4W6 797 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 ZHX2Q9Y6X8 837 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 DOCK3Q8IZD9 2030 aa10.94□□□□□ -0.66
BRIP1-204ENST00000579028 RANBP2P49792 3224 aaKnown RBP10.94□□□□□ -0.66
BRIP1-204ENST00000579028 DOCK1Q14185 1865 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 PHIPQ8WWQ0 1821 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 MAP3K10Q02779 954 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 PUM3Q15397 648 aaKnown RBP10.93□□□□□ -0.66
BRIP1-204ENST00000579028 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 SLC4A10Q6U841 1118 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 TDHQ8IZJ6 230 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 ANKRD44Q8N8A2 993 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 SMCR8Q8TEV9 937 aaPredicted RBP10.93□□□□□ -0.66
BRIP1-204ENST00000579028 COA7Q96BR5 231 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 PICK1Q9NRD5 415 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 ZMYND8Q9ULU4 1186 aaPredicted RBP10.93□□□□□ -0.66
BRIP1-204ENST00000579028 COL6A3P12111 3177 aa10.93□□□□□ -0.66
BRIP1-204ENST00000579028 HMGCRP04035 888 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
BRIP1-204ENST00000579028 PRDX5P30044 214 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
BRIP1-204ENST00000579028 FAM110CQ1W6H9 321 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 COL25A1Q9BXS0 654 aaPredicted RBP10.92□□□□□ -0.66
BRIP1-204ENST00000579028 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 USP40Q9NVE5 1235 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
BRIP1-204ENST00000579028 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
BRIP1-204ENST00000579028 RFX7Q2KHR2 1363 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 HAX1O00165 279 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 CTNND1O60716 968 aaKnown RBP10.91□□□□□ -0.66
BRIP1-204ENST00000579028 ENTPD3O75355 529 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 SYN1P17600 705 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
BRIP1-204ENST00000579028 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 KLHDC4Q8TBB5 520 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 IDI2Q9BXS1 227 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
BRIP1-204ENST00000579028 RPTORQ8N122 1335 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 LDHBP07195 334 aaKnown RBP10.9□□□□□ -0.66
BRIP1-204ENST00000579028 SLC5A1P13866 664 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 RGS3P49796 1198 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 CCDC184Q52MB2 194 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 LPIN2Q92539 896 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 HMX1Q9NP08 348 aaPredicted RBP10.9□□□□□ -0.66
BRIP1-204ENST00000579028 GJD2Q9UKL4 321 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 PNMA3Q9UL41 463 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 OGDHLQ9ULD0 1010 aa10.9□□□□□ -0.66
BRIP1-204ENST00000579028 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
BRIP1-204ENST00000579028 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
BRIP1-204ENST00000579028 GAKO14976 1311 aa10.89□□□□□ -0.67
BRIP1-204ENST00000579028 TRIM75PA6NK02 468 aa10.89□□□□□ -0.67
BRIP1-204ENST00000579028 GCLCP48506 637 aaPredicted RBP10.89□□□□□ -0.67
BRIP1-204ENST00000579028 EVX2Q03828 476 aa10.89□□□□□ -0.67
BRIP1-204ENST00000579028 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
BRIP1-204ENST00000579028 UBE2OQ9C0C9 1292 aaKnown RBP10.89□□□□□ -0.67
BRIP1-204ENST00000579028 MYH2Q9UKX2 1941 aa10.89□□□□□ -0.67
BRIP1-204ENST00000579028 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
BRIP1-204ENST00000579028 PFASO15067 1338 aa10.88□□□□□ -0.67
BRIP1-204ENST00000579028 COL2A1P02458 1487 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms