RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 KIAA0319Q5VV43 1072 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 RNF219Q5W0B1 726 aaPredicted RBP5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 CXorf57Q6NSI4 855 aaKnown RBP5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 ERAP2Q6P179 960 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 UBR7Q8N806 425 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 ZBTB38Q8NAP3 1195 aaPredicted RBP5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 C1orf131Q8NDD1 294 aaKnown RBP5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 GLIS3Q8NEA6 775 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 PMEPA1Q969W9 287 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 CHMP4CQ96CF2 233 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 PKNOX2Q96KN3 472 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 NEUROD6Q96NK8 337 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 NLRP3Q96P20 1036 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 KIF2CQ99661 725 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 RUSC1Q9BVN2 902 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 TNKS2Q9H2K2 1166 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 ZFYVE1Q9HBF4 777 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 STRN4Q9NRL3 753 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 SLC5A4Q9NY91 659 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 HCN4Q9Y3Q4 1203 aa5.36□□□□□ -1.55
GAPLINC-201ENST00000578664 ANO9A1A5B4 782 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 TTLL8A6PVC2 850 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 F6X3S4 739 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 IRS4O14654 1257 aaPredicted RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 RAPGEF3O95398 923 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 FAM153BP0C7A2 387 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 PHKG2P15735 406 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 DGKGP49619 791 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 FAM160A1Q05DH4 1040 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 PICALMQ13492 652 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 TLR1Q15399 786 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 HIF1AQ16665 826 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 SEZ6Q53EL9 994 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 FNDC3BQ53EP0 1204 aaKnown RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 SNAP47Q5SQN1 464 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 LARP1BQ659C4 914 aaKnown RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 HDGFL2Q7Z4V5 671 aaPredicted RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 NLRP8Q86W28 1048 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 ENAHQ8N8S7 591 aaPredicted RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 C19orf47Q8N9M1 422 aaKnown RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 PJA1Q8NG27 643 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 L3MBTL2Q969R5 705 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 HOOK2Q96ED9 719 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 TRIM47Q96LD4 638 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 FERD3LQ96RJ6 166 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 HERPUD2Q9BSE4 406 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 SARGQ9BW04 601 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 SPATA9Q9BWV2 254 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 PTPRHQ9HD43 1115 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 POLMQ9NP87 494 aaPredicted RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 AASDHPPTQ9NRN7 309 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 INTS7Q9NVH2 962 aaKnown RBP5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 USP25Q9UHP3 1055 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 GTF2A1LQ9UNN4 478 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 USP3Q9Y6I4 520 aa5.35□□□□□ -1.55
GAPLINC-201ENST00000578664 TMEM238LA0A1B0GVL6 79 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 PRRT4C9JH25 899 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 PLD2O14939 933 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 EPB41L2O43491 1005 aaKnown RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 TCEA3O75764 348 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 DDAH1O94760 285 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 NPTXRO95502 500 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 CALRP27797 417 aaKnown RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 LIG3P49916 1009 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 RPS26P62854 115 aaKnown RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 MTMR1Q13613 665 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 SIM2Q14190 667 aaPredicted RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 KRT72Q14CN4 511 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 WDR44Q5JSH3 913 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 AGMOQ6ZNB7 445 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 ZNF438Q7Z4V0 828 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 DRC7Q8IY82 874 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 CPXCR1Q8N123 301 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 SDR16C5Q8N3Y7 309 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 CXorf38Q8TB03 319 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 KIFC2Q96AC6 838 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 ZSCAN10Q96SZ4 725 aaPredicted RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 RTFDC1Q9BY42 306 aaPredicted RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 PHACTR1Q9C0D0 580 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 PUS7LQ9H0K6 701 aaKnown RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 ELP3Q9H9T3 547 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 SENP2Q9HC62 589 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 NGRNQ9NPE2 291 aaKnown RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 PRDM11Q9NQV5 511 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 OBP2AQ9NY56 170 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 GMPR2Q9P2T1 348 aaKnown RBP5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 KLF15Q9UIH9 416 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 DNMT3LQ9UJW3 386 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 ZNF180Q9UJW8 692 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 ZNF232Q9UNY5 417 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 TLR6Q9Y2C9 796 aa5.34□□□□□ -1.55
GAPLINC-201ENST00000578664 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 NBPF7P0C2Y1 421 aaPredicted RBP5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 ITKQ08881 620 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 PPP2R5EQ16537 467 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 HGSNATQ68CP4 663 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 FAM178BQ8IXR5 827 aa5.33□□□□□ -1.56
GAPLINC-201ENST00000578664 AHI1Q8N157 1196 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms