RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-210	ENST00000578557	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.43	□□□□□ -0.74	1e-10	■□□□□ 9.6
PPP4R1-210	ENST00000578557	TDRD3	Q9H7E2	651 aa	Known RBP	10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	ZNF408	Q9H9D4	720 aa		10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	VEZT	Q9HBM0	779 aa		10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	GINM1	Q9NU53	330 aa		10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	USP40	Q9NVE5	1235 aa		10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	DBNL	Q9UJU6	430 aa	Known RBP	10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	COL4A1	P02462	1669 aa		10.43	□□□□□ -0.74
PPP4R1-210	ENST00000578557	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	MROH7-TTC4	A0A0A0MT08	1334 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	TTC41P	Q6P2S7	1318 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	ADM5	C9JUS6	153 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	TBC1D12	O60347	775 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	WDHD1	O75717	1129 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	PRDX5	P30044	214 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	PLCB2	Q00722	1185 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	MECOM	Q03112	1051 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	SREBF2	Q12772	1141 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	TTLL12	Q14166	644 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	NAA16	Q6N069	864 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	TBC1D2	Q9BYX2	928 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	ECHDC1	Q9NTX5	307 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	SAGE1	Q9NXZ1	904 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	DAGLA	Q9Y4D2	1042 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	ADAMTSL1	Q8N6G6	1762 aa		10.42	□□□□□ -0.74
PPP4R1-210	ENST00000578557	CYP2E1	P05181	493 aa	Predicted RBP	10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	ZFY	P08048	801 aa	Predicted RBP	10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	MAP3K9	P80192	1104 aa		10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	MAP3K10	Q02779	954 aa		10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	CDC42EP5	Q6NZY7	148 aa		10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	WBP1L	Q9NX94	342 aa		10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	MKRN1	Q9UHC7	482 aa	Known RBP	10.41	□□□□□ -0.74
PPP4R1-210	ENST00000578557	CLRN2	A0PK11	232 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	MANSC4	A6NHS7	340 aa	Predicted RBP	10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	SLC10A3	P09131	477 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	CTCF	P49711	727 aa	Predicted RBP	10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	SLAIN1	Q8ND83	568 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	HAUS7	Q99871	368 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	ZNF341	Q9BYN7	854 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	JAG2	Q9Y219	1238 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	CSAD	Q9Y600	493 aa		10.4	□□□□□ -0.74
PPP4R1-210	ENST00000578557	TCP10L2	B9ZVM9	353 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	USP2	O75604	605 aa	Predicted RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	GLRX3	O76003	335 aa	Known RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	BTD	P43251	543 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ZAP70	P43403	619 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TM4SF4	P48230	202 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	NOM1	Q5C9Z4	860 aa	Known RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	DDRGK1	Q96HY6	314 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TEPSIN	Q96N21	525 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	IL1RAPL2	Q9NP60	686 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ZCCHC17	Q9NP64	241 aa	Known RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	PRDM10	Q9NQV6	1147 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	PI4KB	Q9UBF8	816 aa		10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	HERC5	Q9UII4	1024 aa	Known RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ANGEL1	Q9UNK9	670 aa	Known RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.39	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CACNA1S	Q13698	1873 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ASTN2	O75129	1339 aa	Predicted RBP	10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	IDH1	O75874	414 aa	Known RBP	10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	PPAT	Q06203	517 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	UBE3C	Q15386	1083 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CYP4F22	Q6NT55	531 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TTC6	Q86TZ1	520 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CRBN	Q96SW2	442 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CFHR5	Q9BXR6	569 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ZNF112	Q9UJU3	913 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	PCDHB15	Q9Y5E8	787 aa		10.38	□□□□□ -0.75
PPP4R1-210	ENST00000578557	UBE2Q2L	H0YL09	131 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CTNND1	O60716	968 aa	Known RBP	10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	HLA-DOA	P06340	250 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	GNAT2	P19087	354 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TAF1	P21675	1872 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	GTF2A2	P52657	109 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ARHGEF6	Q15052	776 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	DIXDC1	Q155Q3	683 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	GRIK5	Q16478	980 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CCDC88A	Q3V6T2	1871 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	SLC9C2	Q5TAH2	1124 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TMEM92	Q6UXU6	159 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ERO1B	Q86YB8	467 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	SMC5	Q8IY18	1101 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	AMOTL1	Q8IY63	956 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ATP8A2	Q9NTI2	1148 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	PAG1	Q9NWQ8	432 aa		10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.37	□□□□□ -0.75
PPP4R1-210	ENST00000578557	TESPA1	A2RU30	521 aa	Predicted RBP	10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	FAM155A	B1AL88	458 aa	Predicted RBP	10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	CYP7A1	P22680	504 aa		10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	RHBDL3	P58872	404 aa		10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	HTRA3	P83110	453 aa		10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	NOL9	Q5SY16	702 aa	Known RBP	10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	ANKRD45	Q5TZF3	282 aa		10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	SPRYD7	Q5W111	196 aa		10.36	□□□□□ -0.75
PPP4R1-210	ENST00000578557	GIMAP6	Q6P9H5	292 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms