RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 LRRCC1Q9C099 1032 aa16.65■□□□□ 0.26
CSNK1D-208ENST00000578501 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
CSNK1D-208ENST00000578501 AAMPQ13685 434 aa16.64■□□□□ 0.25
CSNK1D-208ENST00000578501 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.25
CSNK1D-208ENST00000578501 PIH1D3Q9NQM4 214 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-208ENST00000578501 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
CSNK1D-208ENST00000578501 BAG3O95817 575 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 PLCG2P16885 1265 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 RGS3P49796 1198 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 INHBEP58166 350 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 PPP4CP60510 307 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 WNK4Q96J92 1243 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 CRBNQ96SW2 442 aa16.63■□□□□ 0.25
CSNK1D-208ENST00000578501 TTF1Q15361 905 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-208ENST00000578501 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
CSNK1D-208ENST00000578501 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-208ENST00000578501 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
CSNK1D-208ENST00000578501 CSADQ9Y600 493 aa16.62■□□□□ 0.25
CSNK1D-208ENST00000578501 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 ATP5JP18859 108 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 MAP3K12Q12852 859 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 VGLL4Q14135 290 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 DDX4Q9NQI0 724 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 ZNF112Q9UJU3 913 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 TRIM17Q9Y577 477 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
CSNK1D-208ENST00000578501 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 ADGRA1Q86SQ6 560 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 WRNIP1Q96S55 665 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 ATRNL1Q5VV63 1379 aa16.6■□□□□ 0.25
CSNK1D-208ENST00000578501 GJA5P36382 358 aa16.59■□□□□ 0.25
CSNK1D-208ENST00000578501 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
CSNK1D-208ENST00000578501 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
CSNK1D-208ENST00000578501 ELP3Q9H9T3 547 aa16.59■□□□□ 0.25
CSNK1D-208ENST00000578501 AATFQ9NY61 560 aaKnown RBP eCLIP16.59■□□□□ 0.25
CSNK1D-208ENST00000578501 COL2A1P02458 1487 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-208ENST00000578501 OTOFQ9HC10 1997 aa16.58■□□□□ 0.25
CSNK1D-208ENST00000578501 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 POTEFA5A3E0 1075 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 SPDYE5A6NIY4 337 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 TBC1D12O60347 775 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 CYP7A1P22680 504 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 PICALMQ13492 652 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 MAGEB6Q8N7X4 407 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 HAUS7Q99871 368 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 OSBPL5Q9H0X9 879 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 R3HDMLQ9H3Y0 253 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
CSNK1D-208ENST00000578501 LAMB1P07942 1786 aa16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 PHF20L1A8MW92 1017 aa16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 ERO1BQ86YB8 467 aa16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 ERO1AQ96HE7 468 aa16.57■□□□□ 0.24
CSNK1D-208ENST00000578501 DOCK2Q92608 1830 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 GOLIM4O00461 696 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 IFNL1Q8IU54 200 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 MS4A4AQ96JQ5 239 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 BCL11AQ9H165 835 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 BOLA2Q9H3K6 86 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 PAG1Q9NWQ8 432 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-208ENST00000578501 INPP5BP32019 993 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 GTF2A2P52657 109 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 PPATQ06203 517 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 OTUD7BQ6GQQ9 843 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 TGFBRAP1Q8WUH2 860 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
CSNK1D-208ENST00000578501 FLT1P17948 1338 aa16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 PDE6AP16499 860 aa16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 PPIL2Q13356 520 aa16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 PI4KBQ9UBF8 816 aa16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-208ENST00000578501 TCRBV5S4A2TA0A5A2 114 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms