RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 NAPBQ9H115 298 aa12.75□□□□□ -0.37
USP22-208ENST00000578446 DCP1AQ9NPI6 582 aaPredicted RBP12.75□□□□□ -0.37
USP22-208ENST00000578446 DDX4Q9NQI0 724 aaKnown RBP12.75□□□□□ -0.37
USP22-208ENST00000578446 MCM9Q9NXL9 1143 aa12.75□□□□□ -0.37
USP22-208ENST00000578446 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
USP22-208ENST00000578446 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
USP22-208ENST00000578446 CNTNAP1P78357 1384 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 GSG1L2A8MUP6 293 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
USP22-208ENST00000578446 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
USP22-208ENST00000578446 POTEIP0CG38 1075 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 RASA3Q14644 834 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 GIMAP6Q6P9H5 292 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 FAM83AQ86UY5 434 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 DSCC1Q9BVC3 393 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
USP22-208ENST00000578446 DEFB129Q9H1M3 183 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 EPB41L4AQ9HCS5 686 aaPredicted RBP12.74□□□□□ -0.37
USP22-208ENST00000578446 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
USP22-208ENST00000578446 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
USP22-208ENST00000578446 FOXP2O15409 715 aa12.73□□□□□ -0.37
USP22-208ENST00000578446 SLC4A8Q2Y0W8 1093 aa12.73□□□□□ -0.37
USP22-208ENST00000578446 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
USP22-208ENST00000578446 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
USP22-208ENST00000578446 FAM151AQ8WW52 585 aa12.73□□□□□ -0.37
USP22-208ENST00000578446 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
USP22-208ENST00000578446 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
USP22-208ENST00000578446 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
USP22-208ENST00000578446 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
USP22-208ENST00000578446 ZMYM6O95789 1325 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 POLR3DP05423 398 aaPredicted RBP12.72□□□□□ -0.37
USP22-208ENST00000578446 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 PTH1RQ03431 593 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
USP22-208ENST00000578446 CDC37L1Q7L3B6 337 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 CSRNP1Q96S65 589 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 LSG1Q9H089 658 aaKnown RBP12.72□□□□□ -0.37
USP22-208ENST00000578446 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
USP22-208ENST00000578446 MKRN1Q9UHC7 482 aaKnown RBP12.72□□□□□ -0.37
USP22-208ENST00000578446 PGAP2Q9UHJ9 254 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 CTNNA3Q9UI47 895 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
USP22-208ENST00000578446 ATRNL1Q5VV63 1379 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 USP17L12C9JPN9 530 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 USP17L21D6R901 530 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 KIF3CO14782 793 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 FGAP02671 866 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 ALX1Q15699 326 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 CTR9Q6PD62 1173 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
USP22-208ENST00000578446 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.37
USP22-208ENST00000578446 RBM8AQ9Y5S9 174 aaKnown RBP12.71□□□□□ -0.37
USP22-208ENST00000578446 CYP2D7A0A087X1C5 515 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
USP22-208ENST00000578446 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 CYP2D6P10635 497 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 IMMTQ16891 758 aaKnown RBP12.7□□□□□ -0.38
USP22-208ENST00000578446 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 MAP4K1Q92918 833 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
USP22-208ENST00000578446 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
USP22-208ENST00000578446 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
USP22-208ENST00000578446 ZNF213O14771 459 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
USP22-208ENST00000578446 MCCP23508 829 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 NF2P35240 595 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 HAND2P61296 217 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 PPARAQ07869 468 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 SBK1Q52WX2 424 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 C12orf60Q5U649 245 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 PRAMEF18Q5VWM3 479 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 CRACR2BQ8N4Y2 399 aaPredicted RBP12.69□□□□□ -0.38
USP22-208ENST00000578446 CDCA5Q96FF9 252 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 PI4KBQ9UBF8 816 aa12.69□□□□□ -0.38
USP22-208ENST00000578446 TRAF5O00463 557 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
USP22-208ENST00000578446 SEC24BO95487 1268 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 PLCD1P51178 756 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 NBPF12Q5TAG4 269 aaPredicted RBP12.68□□□□□ -0.38
USP22-208ENST00000578446 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 TEPSINQ96N21 525 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 BACH2Q9BYV9 841 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 EHD4Q9H223 541 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
USP22-208ENST00000578446 TOMM70O94826 608 aa12.67□□□□□ -0.38
USP22-208ENST00000578446 EVX2Q03828 476 aa12.67□□□□□ -0.38
USP22-208ENST00000578446 CTDSPL2Q05D32 466 aa12.67□□□□□ -0.38
USP22-208ENST00000578446 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms