RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 AATFQ9NY61 560 aaKnown RBP eCLIP26.96■■□□□ 1.91
SMARCD2-206ENST00000577990 ZBTB47Q9UFB7 747 aaPredicted RBP26.96■■□□□ 1.91
SMARCD2-206ENST00000577990 AK9Q5TCS8 1911 aa26.96■■□□□ 1.91
SMARCD2-206ENST00000577990 DDX4Q9NQI0 724 aaKnown RBP26.95■■□□□ 1.9
SMARCD2-206ENST00000577990 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.95■■□□□ 1.9
SMARCD2-206ENST00000577990 UNCXA6NJT0 531 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 PLCG2P16885 1265 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 PPP4CP60510 307 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 PICALMQ13492 652 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 ANKRD45Q5TZF3 282 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 ZFPM1Q8IX07 1006 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 TEX11Q8IYF3 940 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 EDC3Q96F86 508 aaKnown RBP26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 SAGE1Q9NXZ1 904 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 OTOFQ9HC10 1997 aa26.94■■□□□ 1.9
SMARCD2-206ENST00000577990 NPM3O75607 178 aaKnown RBP26.93■■□□□ 1.9
SMARCD2-206ENST00000577990 DCAF15Q66K64 600 aa26.93■■□□□ 1.9
SMARCD2-206ENST00000577990 SH3RF3Q8TEJ3 882 aaPredicted RBP26.93■■□□□ 1.9
SMARCD2-206ENST00000577990 ANKRD13AQ8IZ07 590 aa26.92■■□□□ 1.9
SMARCD2-206ENST00000577990 PDE6AP16499 860 aa26.91■■□□□ 1.9
SMARCD2-206ENST00000577990 TSHZ3Q63HK5 1081 aa26.91■■□□□ 1.9
SMARCD2-206ENST00000577990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.91■■□□□ 1.9
SMARCD2-206ENST00000577990 CLMNQ96JQ2 1002 aa26.91■■□□□ 1.9
SMARCD2-206ENST00000577990 TTC41PQ6P2S7 1318 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 IGHDP01880 384 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 SLC9C2Q5TAH2 1124 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 SH3BP5LQ7L8J4 393 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 ZSCAN29Q8IWY8 852 aaPredicted RBP26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 SMC5Q8IY18 1101 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 MIGA1Q8NAN2 632 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 OTUD7AQ8TE49 926 aaPredicted RBP26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 SLC10A4Q96EP9 437 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 ZNF341Q9BYN7 854 aa26.9■■□□□ 1.9
SMARCD2-206ENST00000577990 DYNLL1P63167 89 aaKnown RBP26.89■■□□□ 1.9
SMARCD2-206ENST00000577990 MAP3K9P80192 1104 aa26.89■■□□□ 1.9
SMARCD2-206ENST00000577990 MIGA2Q7L4E1 593 aa26.89■■□□□ 1.9
SMARCD2-206ENST00000577990 CERS3Q8IU89 383 aa26.89■■□□□ 1.9
SMARCD2-206ENST00000577990 MCOLN1Q9GZU1 580 aa26.89■■□□□ 1.9
SMARCD2-206ENST00000577990 CDK5RAP2Q96SN8 1893 aa26.89■■□□□ 1.89
SMARCD2-206ENST00000577990 COL2A1P02458 1487 aaPredicted RBP26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 ATRNL1Q5VV63 1379 aa26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 DDTLA6NHG4 134 aaPredicted RBP26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 MX1P20591 662 aa26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 WRNIP1Q96S55 665 aa26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 OSBPL5Q9H0X9 879 aaPredicted RBP26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 FOCADQ5VW36 1801 aa26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 ZNF532Q9HCE3 1301 aa26.88■■□□□ 1.89
SMARCD2-206ENST00000577990 MYH7P12883 1935 aa26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 ERC2O15083 957 aa26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 DGKZQ13574 1117 aa26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 SPRYD7Q5W111 196 aa26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 REM2Q8IYK8 340 aaPredicted RBP26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 CSADQ9Y600 493 aa26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 SALL3Q9BXA9 1300 aa26.87■■□□□ 1.89
SMARCD2-206ENST00000577990 TCRBV5S4A2TA0A5A2 114 aa26.86■■□□□ 1.89
SMARCD2-206ENST00000577990 VGLL4Q14135 290 aa26.86■■□□□ 1.89
SMARCD2-206ENST00000577990 TGFBRAP1Q8WUH2 860 aa26.86■■□□□ 1.89
SMARCD2-206ENST00000577990 WNK4Q96J92 1243 aa26.86■■□□□ 1.89
SMARCD2-206ENST00000577990 ELP3Q9H9T3 547 aa26.86■■□□□ 1.89
SMARCD2-206ENST00000577990 LAMB1P07942 1786 aa26.86■■□□□ 1.89
SMARCD2-206ENST00000577990 GLRX3O76003 335 aaKnown RBP26.85■■□□□ 1.89
SMARCD2-206ENST00000577990 ADD2P35612 726 aa26.85■■□□□ 1.89
SMARCD2-206ENST00000577990 MAPKAPK5Q8IW41 473 aa26.85■■□□□ 1.89
SMARCD2-206ENST00000577990 PI4K2BQ8TCG2 481 aa26.85■■□□□ 1.89
SMARCD2-206ENST00000577990 FLT1P17948 1338 aa26.85■■□□□ 1.89
SMARCD2-206ENST00000577990 MAGEB6P1A0A0J9YX57 407 aa26.84■■□□□ 1.89
SMARCD2-206ENST00000577990 ZBTB48P10074 688 aaPredicted RBP26.84■■□□□ 1.89
SMARCD2-206ENST00000577990 B4GALNT3Q6L9W6 998 aa26.84■■□□□ 1.89
SMARCD2-206ENST00000577990 RIOK1Q9BRS2 568 aaKnown RBP26.84■■□□□ 1.89
SMARCD2-206ENST00000577990 ZNF112Q9UJU3 913 aa26.84■■□□□ 1.89
SMARCD2-206ENST00000577990 CCDC85CA6NKD9 419 aa26.83■■□□□ 1.89
SMARCD2-206ENST00000577990 TBC1D8O95759 1140 aa26.83■■□□□ 1.89
SMARCD2-206ENST00000577990 LNPKQ9C0E8 428 aa26.83■■□□□ 1.89
SMARCD2-206ENST00000577990 TM4SF4P48230 202 aa26.82■■□□□ 1.88
SMARCD2-206ENST00000577990 MAP3K10Q02779 954 aa26.82■■□□□ 1.88
SMARCD2-206ENST00000577990 ZSCAN25Q6NSZ9 544 aa26.82■■□□□ 1.88
SMARCD2-206ENST00000577990 KBTBD3Q8NAB2 608 aa26.82■■□□□ 1.88
SMARCD2-206ENST00000577990 ZKSCAN4Q969J2 545 aaPredicted RBP26.82■■□□□ 1.88
SMARCD2-206ENST00000577990 SNCAIPQ9Y6H5 919 aa26.82■■□□□ 1.88
SMARCD2-206ENST00000577990 INPP5BP32019 993 aa26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 GJA5P36382 358 aa26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 USP5P45974 858 aa26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 NUCB1Q02818 461 aa26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 UBE3CQ15386 1083 aa26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 OPTNQ96CV9 577 aa26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 DHX36Q9H2U1 1008 aaKnown RBP26.81■■□□□ 1.88
SMARCD2-206ENST00000577990 SREBF2Q12772 1141 aa26.8■■□□□ 1.88
SMARCD2-206ENST00000577990 SLFNL1Q499Z3 407 aa26.8■■□□□ 1.88
SMARCD2-206ENST00000577990 CHD1LQ86WJ1 897 aa26.8■■□□□ 1.88
SMARCD2-206ENST00000577990 STAP2Q9UGK3 403 aa26.8■■□□□ 1.88
SMARCD2-206ENST00000577990 TBC1D12O60347 775 aa26.79■■□□□ 1.88
SMARCD2-206ENST00000577990 SLURP2P0DP57 97 aa26.79■■□□□ 1.88
SMARCD2-206ENST00000577990 PDE1AP54750 535 aa26.79■■□□□ 1.88
SMARCD2-206ENST00000577990 CNKSR2Q8WXI2 1034 aa26.79■■□□□ 1.88
SMARCD2-206ENST00000577990 CRNKL1Q9BZJ0 848 aaKnown RBP26.79■■□□□ 1.88
SMARCD2-206ENST00000577990 MANSC4A6NHS7 340 aaPredicted RBP26.78■■□□□ 1.88
SMARCD2-206ENST00000577990 SPDYE5A6NIY4 337 aa26.78■■□□□ 1.88
SMARCD2-206ENST00000577990 PHF20L1A8MW92 1017 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms