RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 MAP3K11Q16584 847 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 SLC4A8Q2Y0W8 1093 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 SLC9C2Q5TAH2 1124 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 TGFBRAP1Q8WUH2 860 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 IDI2Q9BXS1 227 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
CDKN2A-211ENST00000577854 DDTLA6NHG4 134 aaPredicted RBP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 MANSC4A6NHS7 340 aaPredicted RBP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 ZBTB48P10074 688 aaPredicted RBP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 ATP5JP18859 108 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 INPP5BP32019 993 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 DYNLL1P63167 89 aaKnown RBP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 PICK1Q9NRD5 415 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 ECHDC1Q9NTX5 307 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 RNF186Q9NXI6 227 aa11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
CDKN2A-211ENST00000577854 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 CRACR2BQ8N4Y2 399 aaPredicted RBP11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 OSBPL5Q9H0X9 879 aaPredicted RBP11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
CDKN2A-211ENST00000577854 ZNF532Q9HCE3 1301 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 MYH2Q9UKX2 1941 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 ERC2O15083 957 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 TBC1D8O95759 1140 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 HLA-DOAP06340 250 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 PDE6AP16499 860 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 GTF2A2P52657 109 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 ERO1BQ86YB8 467 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 HAUS7Q99871 368 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 SNCAIPQ9Y6H5 919 aa11.18□□□□□ -0.62
CDKN2A-211ENST00000577854 FLT1P17948 1338 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 CCL15-CCL14A0A0B4J2E2 113 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 IGSF3O75054 1194 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 CAPN15O75808 1086 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 SLURP2P0DP57 97 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 GJA5P36382 358 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 INHBEP58166 350 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 AAMPQ13685 434 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 CCL15Q16663 113 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 CERS3Q8IU89 383 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 CRNKL1Q9BZJ0 848 aaKnown RBP11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 PALD1Q9ULE6 856 aa11.17□□□□□ -0.62
CDKN2A-211ENST00000577854 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 MAST2Q6P0Q8 1798 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 CETPP11597 493 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 MX1P20591 662 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 TM4SF4P48230 202 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 PPP4CP60510 307 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 SNAPC2Q13487 334 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 DHX36Q9H2U1 1008 aaKnown RBP11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 PI4KBQ9UBF8 816 aa11.16□□□□□ -0.62
CDKN2A-211ENST00000577854 AK9Q5TCS8 1911 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 IGF2BP3O00425 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 IRF6O14896 467 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 MBD4O95243 580 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 PPIL2Q13356 520 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 SLFNL1Q499Z3 407 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 TMED8Q6PL24 325 aaPredicted RBP11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 OTUD7AQ8TE49 926 aaPredicted RBP11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 LNPKQ9C0E8 428 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 ARMT1Q9H993 441 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 ZHX2Q9Y6X8 837 aa11.15□□□□□ -0.62
CDKN2A-211ENST00000577854 ATRNL1Q5VV63 1379 aa11.15□□□□□ -0.63
CDKN2A-211ENST00000577854 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
CDKN2A-211ENST00000577854 CTNND1O60716 968 aaKnown RBP11.14□□□□□ -0.63
CDKN2A-211ENST00000577854 GLRX3O76003 335 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms