RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 SIRT2Q8IXJ6 389 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 BRI3BPQ8WY22 251 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 OTUD5Q96G74 571 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 CHMP4BQ9H444 224 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 DDX4Q9NQI0 724 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 TLR7Q9NYK1 1049 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 EXOC6BQ9Y2D4 811 aa15.27■□□□□ 0.04
CSNK1D-206ENST00000577578 FKTNO75072 461 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 INPP5BP32019 993 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 PPATQ06203 517 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 PPIL2Q13356 520 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 PKN2Q16513 984 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 SNRKQ9NRH2 765 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 RAI14Q9P0K7 980 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 LRP2BPQ9P2M1 347 aa15.26■□□□□ 0.03
CSNK1D-206ENST00000577578 DOCK1Q14185 1865 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 DDTLA6NHG4 134 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 IRF6O14896 467 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 CRHR2Q13324 411 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 CCL15Q16663 113 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 PTPRFP10586 1907 aa15.25■□□□□ 0.03
CSNK1D-206ENST00000577578 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 CENPFP49454 3210 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 HMMRO75330 724 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 ZAP70P43403 619 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 PPP4CP60510 307 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 SNAPC2Q13487 334 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
CSNK1D-206ENST00000577578 SIPA1L1O43166 1804 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 CCDC85CA6NKD9 419 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 TBC1D12O60347 775 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 CETPP11597 493 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 RGS19P49795 217 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 C20orf194Q5TEA3 1177 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 NAA16Q6N069 864 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 AACSQ86V21 672 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 FAM43AQ8N2R8 423 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
CSNK1D-206ENST00000577578 PICALMQ13492 652 aa15.22■□□□□ 0.03
CSNK1D-206ENST00000577578 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-206ENST00000577578 ZSCAN29Q8IWY8 852 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-206ENST00000577578 OSBPL5Q9H0X9 879 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-206ENST00000577578 PIH1D3Q9NQM4 214 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-206ENST00000577578 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 BAG3O95817 575 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 PLCG2P16885 1265 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 MOGSQ13724 837 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 SH3RF3Q8TEJ3 882 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 IL1RAPL2Q9NP60 686 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 ATAD5Q96QE3 1844 aa15.21■□□□□ 0.03
CSNK1D-206ENST00000577578 BTBD19C9JJ37 291 aa15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 TAF1CQ15572 869 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 FBXO46Q6PJ61 603 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 TEX11Q8IYF3 940 aa15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 CLASRPQ8N2M8 674 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 ERO1AQ96HE7 468 aa15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 ZFYVE28Q9HCC9 887 aa15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 AATFQ9NY61 560 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 HPS5Q9UPZ3 1129 aa15.2■□□□□ 0.02
CSNK1D-206ENST00000577578 CXCL11O14625 94 aa15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 SLURP2P0DP57 97 aa15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 PTPRAP18433 802 aa15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 SP3Q02447 781 aa15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 ANKRD23Q86SG2 305 aa15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 ANTXR1Q9H6X2 564 aa15.19■□□□□ 0.02
CSNK1D-206ENST00000577578 MYH1P12882 1939 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 TNRC18O15417 2968 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 TLR2O60603 784 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 CAP1Q01518 475 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 OTOP1Q7RTM1 612 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 PICK1Q9NRD5 415 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 AFG3L2Q9Y4W6 797 aa15.18■□□□□ 0.02
CSNK1D-206ENST00000577578 FLT1P17948 1338 aa15.17■□□□□ 0.02
CSNK1D-206ENST00000577578 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
CSNK1D-206ENST00000577578 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
CSNK1D-206ENST00000577578 TRIM17Q9Y577 477 aa15.17■□□□□ 0.02
CSNK1D-206ENST00000577578 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
CSNK1D-206ENST00000577578 ZHX2Q9Y6X8 837 aa15.17■□□□□ 0.02
CSNK1D-206ENST00000577578 BRCA2P51587 3418 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms