RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 GATA6Q92908 595 aa6.98□□□□□ -1.29
TRAPPC8-203ENST00000577474 TRAK1Q9UPV9 953 aa6.98□□□□□ -1.29
TRAPPC8-203ENST00000577474 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC8-203ENST00000577474 NFKBIEO00221 500 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 BIN1O00499 593 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 DRD2P14416 443 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 DNAJA1P31689 397 aaKnown RBP6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 C19orf57Q0VDD7 668 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 PWP1Q13610 501 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 DPH6Q7L8W6 267 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 NOC4LQ9BVI4 516 aaKnown RBP6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 CYP4F12Q9HCS2 524 aa6.97□□□□□ -1.29
TRAPPC8-203ENST00000577474 A6NHS1 94 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 SMARCA5O60264 1052 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 DLGAP3O95886 979 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 USP17L7P0C7H9 530 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 CDK11BP21127 795 aaKnown RBP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 GSTT1P30711 240 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 ARL4DP49703 201 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 USP11P51784 963 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 ZNF792Q3KQV3 632 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 WFDC3Q8IUB2 231 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 GALNT12Q8IXK2 581 aa6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 FOXD3Q9UJU5 478 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 CDK11AQ9UQ88 783 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 TMA7Q9Y2S6 64 aaKnown RBP6.96□□□□□ -1.3
TRAPPC8-203ENST00000577474 GADD45BO75293 160 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 ZNF865P0CJ78 1059 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 RLBP1P12271 317 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 XRCC5P13010 732 aaKnown RBP6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 ACPPP15309 386 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 GJA8P48165 433 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 PKN1Q16512 942 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 EPS8L3Q8TE67 593 aaKnown RBP6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 BCL7CQ8WUZ0 217 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 OSBPL7Q9BZF2 842 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 ZFYVE1Q9HBF4 777 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
TRAPPC8-203ENST00000577474 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 EDN3P14138 238 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 RBL2Q08999 1139 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 PLCL1Q15111 1095 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 ZNF394Q53GI3 561 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 DUSP27Q5VZP5 1158 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 ZNF574Q6ZN55 896 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 ERMP1Q7Z2K6 904 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 KSR1Q8IVT5 923 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 C2CD4AQ8NCU7 369 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 ANKRD24Q8TF21 1146 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 BCO2Q9BYV7 579 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 KANSL3Q9P2N6 904 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 SALL4Q9UJQ4 1053 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 PPM1HQ9ULR3 514 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 SLC5A6Q9Y289 635 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
TRAPPC8-203ENST00000577474 LOC100289279A0A1B0GTE1 492 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 TRPA1O75762 1119 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 CES1P23141 567 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 TNNI2P48788 182 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 EXOSC6Q5RKV6 272 aaKnown RBP6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 SPRED2Q7Z698 418 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 DHX38Q92620 1227 aaKnown RBP6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 GPRASP2Q96D09 838 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 LNPKQ9C0E8 428 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 DZANK1Q9NVP4 752 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 TMEM63CQ9P1W3 806 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 CNTN3Q9P232 1028 aa6.93□□□□□ -1.3
TRAPPC8-203ENST00000577474 PDE2AO00408 941 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 STK10O94804 968 aaKnown RBP6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 RACK1P63244 317 aaKnown RBP6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 KIAA0319Q5VV43 1072 aa6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 ATG4DQ86TL0 474 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 FAM168AQ92567 244 aa6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 HHIPQ96QV1 700 aa6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 RSRP1Q9BUV0 290 aa6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 USP26Q9BXU7 913 aa6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 PCDHGB7Q9Y5F8 929 aa6.92□□□□□ -1.3
TRAPPC8-203ENST00000577474 SOX4Q06945 474 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 MEI1Q5TIA1 1274 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 NBPF6Q5VWK0 638 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 NXPE4Q6UWF7 544 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 PI16Q6UXB8 463 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 GLIS3Q8NEA6 775 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 RASGRP4Q8TDF6 673 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 TMEM40Q8WWA1 233 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 SEC16BQ96JE7 1060 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 NBPF4Q96M43 638 aa6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
TRAPPC8-203ENST00000577474 FGRP09769 529 aa6.9□□□□□ -1.3
TRAPPC8-203ENST00000577474 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
TRAPPC8-203ENST00000577474 VN1R5Q7Z5H4 357 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms