RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 BCRP11274 1271 aa14.65□□□□□ -0.06
CDH8-202ENST00000577228 FXR1P51114 621 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDH8-202ENST00000577228 RASGRF1Q13972 1273 aa14.65□□□□□ -0.06
CDH8-202ENST00000577228 FASTKD5Q7L8L6 764 aaKnown RBP14.65□□□□□ -0.06
CDH8-202ENST00000577228 TRMT2AQ8IZ69 625 aaKnown RBP14.65□□□□□ -0.06
CDH8-202ENST00000577228 NKX2-3Q8TAU0 364 aa14.65□□□□□ -0.06
CDH8-202ENST00000577228 SHISA4Q96DD7 197 aa14.65□□□□□ -0.06
CDH8-202ENST00000577228 MEIS3Q99687 375 aa14.65□□□□□ -0.06
CDH8-202ENST00000577228 COLQQ9Y215 455 aaPredicted RBP14.65□□□□□ -0.06
CDH8-202ENST00000577228 PDS5AQ29RF7 1337 aaKnown RBP14.65□□□□□ -0.06
CDH8-202ENST00000577228 A0A0G2JLL6 359 aaPredicted RBP14.64□□□□□ -0.07
CDH8-202ENST00000577228 H0YGN5 161 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 PTPRAP18433 802 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 BTDP43251 543 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 PRKCZQ05513 592 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 SPTY2D1Q68D10 685 aaPredicted RBP14.64□□□□□ -0.07
CDH8-202ENST00000577228 GADL1Q6ZQY3 521 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 SH3BP5LQ7L8J4 393 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 PRRT2Q7Z6L0 340 aaPredicted RBP14.64□□□□□ -0.07
CDH8-202ENST00000577228 BIN2Q9UBW5 565 aaPredicted RBP14.64□□□□□ -0.07
CDH8-202ENST00000577228 MYH2Q9UKX2 1941 aa14.64□□□□□ -0.07
CDH8-202ENST00000577228 CEP290O15078 2479 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 CCL5P13501 91 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 TIMM10P62072 90 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 UBXN2AP68543 259 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 PICALMQ13492 652 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 FAM163AQ96GL9 167 aaPredicted RBP14.63□□□□□ -0.07
CDH8-202ENST00000577228 DDX4Q9NQI0 724 aaKnown RBP14.63□□□□□ -0.07
CDH8-202ENST00000577228 AKAP2Q9Y2D5 859 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 AFG3L2Q9Y4W6 797 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 BRCA2P51587 3418 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 MROH7-TTC4A0A0A0MT08 1334 aa14.63□□□□□ -0.07
CDH8-202ENST00000577228 A0A1B0GUL7 405 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 DDTLA6NHG4 134 aaPredicted RBP14.62□□□□□ -0.07
CDH8-202ENST00000577228 CTNND1O60716 968 aaKnown RBP14.62□□□□□ -0.07
CDH8-202ENST00000577228 GJB1P08034 283 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 GJA8P48165 433 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 MAP3K10Q02779 954 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 TFCP2Q12800 502 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 MVPQ14764 893 aaKnown RBP14.62□□□□□ -0.07
CDH8-202ENST00000577228 SLAIN1Q8ND83 568 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 XAGE2Q96GT9 111 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 RNF208Q9H0X6 261 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 SLC45A1Q9Y2W3 748 aa14.62□□□□□ -0.07
CDH8-202ENST00000577228 TRIM75PA6NK02 468 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 SRGAP3O43295 1099 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 GNAI3P08754 354 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 SLURP2P0DP57 97 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 ERICH6Q7L0X2 663 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 SMCR8Q8TEV9 937 aaPredicted RBP14.61□□□□□ -0.07
CDH8-202ENST00000577228 DPF3Q92784 378 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 GABRQQ9UN88 632 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
CDH8-202ENST00000577228 GPR75-ASB3A0A0A6YYF3 556 aa14.6□□□□□ -0.07
CDH8-202ENST00000577228 RARSP54136 660 aaKnown RBP14.6□□□□□ -0.07
CDH8-202ENST00000577228 RHBDL3P58872 404 aa14.6□□□□□ -0.07
CDH8-202ENST00000577228 MECOMQ03112 1051 aa14.6□□□□□ -0.07
CDH8-202ENST00000577228 NEUROD6Q96NK8 337 aa14.6□□□□□ -0.07
CDH8-202ENST00000577228 HTATIP2Q9BUP3 242 aa14.6□□□□□ -0.07
CDH8-202ENST00000577228 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.6□□□□□ -0.07
CDH8-202ENST00000577228 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
CDH8-202ENST00000577228 MGAMO43451 1857 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 TNPO2O14787 897 aaKnown RBP14.59□□□□□ -0.07
CDH8-202ENST00000577228 ADCY3O60266 1144 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 FLT3LGP49771 235 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 GSTO1P78417 241 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 MTX1Q13505 466 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 UBE2Q1Q7Z7E8 422 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 CCDC84Q86UT8 332 aaPredicted RBP14.59□□□□□ -0.07
CDH8-202ENST00000577228 U2AF1L4Q8WU68 220 aaKnown RBP14.59□□□□□ -0.07
CDH8-202ENST00000577228 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 UNC93B1Q9H1C4 597 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 AGTPBP1Q9UPW5 1226 aa14.59□□□□□ -0.07
CDH8-202ENST00000577228 PTPRFP10586 1907 aa14.58□□□□□ -0.07
CDH8-202ENST00000577228 TBC1D12O60347 775 aa14.58□□□□□ -0.08
CDH8-202ENST00000577228 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
CDH8-202ENST00000577228 FARP2O94887 1054 aaPredicted RBP14.58□□□□□ -0.08
CDH8-202ENST00000577228 LDHCP07864 332 aa14.58□□□□□ -0.08
CDH8-202ENST00000577228 ELNP15502 786 aa14.58□□□□□ -0.08
CDH8-202ENST00000577228 ZNF384Q8TF68 577 aa14.58□□□□□ -0.08
CDH8-202ENST00000577228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDH8-202ENST00000577228 HMG20BQ9P0W2 317 aa14.58□□□□□ -0.08
CDH8-202ENST00000577228 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
CDH8-202ENST00000577228 PHIPQ8WWQ0 1821 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 MAP4K4O95819 1239 aaPredicted RBP14.57□□□□□ -0.08
CDH8-202ENST00000577228 INHAP05111 366 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 IRF5Q13568 498 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 PI16Q6UXB8 463 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 ANKRD13CQ8N6S4 541 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 PXYLP1Q8TE99 480 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 NSUN4Q96CB9 384 aaKnown RBP14.57□□□□□ -0.08
CDH8-202ENST00000577228 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
CDH8-202ENST00000577228 RAI14Q9P0K7 980 aa14.57□□□□□ -0.08
CDH8-202ENST00000577228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
CDH8-202ENST00000577228 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms