RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
CIITA-211ENST00000576601 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
CIITA-211ENST00000576601 BDP1A6H8Y1 2624 aa17.38■□□□□ 0.37
CIITA-211ENST00000576601 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
CIITA-211ENST00000576601 A0A0G2JLL6 359 aaPredicted RBP17.37■□□□□ 0.37
CIITA-211ENST00000576601 SYN1P17600 705 aa17.37■□□□□ 0.37
CIITA-211ENST00000576601 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
CIITA-211ENST00000576601 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
CIITA-211ENST00000576601 GUCD1Q96NT3 240 aa17.37■□□□□ 0.37
CIITA-211ENST00000576601 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
CIITA-211ENST00000576601 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
CIITA-211ENST00000576601 GRM8O00222 908 aa17.36■□□□□ 0.37
CIITA-211ENST00000576601 TBC1D22AQ8WUA7 517 aa17.36■□□□□ 0.37
CIITA-211ENST00000576601 FAM151AQ8WW52 585 aa17.36■□□□□ 0.37
CIITA-211ENST00000576601 MRIQ9BWK5 157 aa17.36■□□□□ 0.37
CIITA-211ENST00000576601 CXCL11O14625 94 aa17.35■□□□□ 0.37
CIITA-211ENST00000576601 TNPO2O14787 897 aaKnown RBP17.35■□□□□ 0.37
CIITA-211ENST00000576601 NFIAQ12857 509 aa17.35■□□□□ 0.37
CIITA-211ENST00000576601 TAF7LQ5H9L4 462 aa17.35■□□□□ 0.37
CIITA-211ENST00000576601 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
CIITA-211ENST00000576601 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
CIITA-211ENST00000576601 PFASO15067 1338 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 RPTORQ8N122 1335 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 VGLL2Q8N8G2 317 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 CHD9Q3L8U1 2897 aa17.34■□□□□ 0.37
CIITA-211ENST00000576601 PHF20L1A8MW92 1017 aa17.33■□□□□ 0.36
CIITA-211ENST00000576601 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
CIITA-211ENST00000576601 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 MAST3O60307 1309 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 POTEB2H3BUK9 544 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 NBPF7P0C2Y1 421 aaPredicted RBP17.32■□□□□ 0.36
CIITA-211ENST00000576601 TCP10Q12799 353 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 TRIM32Q13049 653 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 SLC45A1Q9Y2W3 748 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 SUGT1Q9Y2Z0 365 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 DAGLAQ9Y4D2 1042 aa17.32■□□□□ 0.36
CIITA-211ENST00000576601 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 CDC42EP5Q6NZY7 148 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 ZFPM1Q8IX07 1006 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
CIITA-211ENST00000576601 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 NBPF3Q9H094 633 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
CIITA-211ENST00000576601 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 XIRP2A4UGR9 3374 aa17.31■□□□□ 0.36
CIITA-211ENST00000576601 MROH5Q6ZUA9 1318 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 HMGCRP04035 888 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 PTPRAP18433 802 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 FASTKD5Q7L8L6 764 aaKnown RBP17.3■□□□□ 0.36
CIITA-211ENST00000576601 VPS37DQ86XT2 251 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 C11orf49Q9H6J7 331 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 ZHX2Q9Y6X8 837 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 CHD7Q9P2D1 2997 aa17.3■□□□□ 0.36
CIITA-211ENST00000576601 DIXDC1Q155Q3 683 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 LRRC24Q50LG9 513 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 SCYL3Q8IZE3 742 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
CIITA-211ENST00000576601 ANKRD13CQ8N6S4 541 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
CIITA-211ENST00000576601 OGDHLQ9ULD0 1010 aa17.29■□□□□ 0.36
CIITA-211ENST00000576601 UTYO14607 1347 aa17.28■□□□□ 0.36
CIITA-211ENST00000576601 RLFQ13129 1914 aa17.28■□□□□ 0.36
CIITA-211ENST00000576601 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
CIITA-211ENST00000576601 FAM110CQ1W6H9 321 aa17.28■□□□□ 0.36
CIITA-211ENST00000576601 FAM109BQ6ICB4 259 aaPredicted RBP17.28■□□□□ 0.36
CIITA-211ENST00000576601 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
CIITA-211ENST00000576601 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
CIITA-211ENST00000576601 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
CIITA-211ENST00000576601 KIF16BQ96L93 1317 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
CIITA-211ENST00000576601 COL6A1P12109 1028 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 CAVIN4Q5BKX8 364 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 TREML2Q5T2D2 321 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 COA7Q96BR5 231 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 GJD2Q9UKL4 321 aa17.27■□□□□ 0.36
CIITA-211ENST00000576601 PDE8BO95263 885 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 FGFR2P21802 821 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 SH3BP5LQ7L8J4 393 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 CCDC84Q86UT8 332 aaPredicted RBP17.26■□□□□ 0.35
CIITA-211ENST00000576601 TRIB2Q92519 343 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 AGTPBP1Q9UPW5 1226 aa17.26■□□□□ 0.35
CIITA-211ENST00000576601 PRDX5P30044 214 aa17.25■□□□□ 0.35
CIITA-211ENST00000576601 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
CIITA-211ENST00000576601 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
CIITA-211ENST00000576601 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
CIITA-211ENST00000576601 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
CIITA-211ENST00000576601 HMX1Q9NP08 348 aaPredicted RBP17.25■□□□□ 0.35
CIITA-211ENST00000576601 MYO9BQ13459 2157 aa17.25■□□□□ 0.35
CIITA-211ENST00000576601 CDK5RAP2Q96SN8 1893 aa17.24■□□□□ 0.35
CIITA-211ENST00000576601 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
CIITA-211ENST00000576601 MDM2Q00987 491 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms