RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CUTAO60888 179 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 FGAP02671 866 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 CCDC175P0C221 793 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 CCT6AP40227 531 aaKnown RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 NOP2P46087 812 aaKnown RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 MRPS25P82663 173 aaKnown RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 HDXQ7Z353 690 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 GSPT2Q8IYD1 628 aaKnown RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 ORAI2Q96SN7 254 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 CCDC151A5D8V7 595 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 BEND6Q5SZJ8 279 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 NOA1Q8NC60 698 aaKnown RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
SCARF1-209ENST00000576012 SERTAD1Q9UHV2 236 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 RBL2Q08999 1139 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 PDIA6Q15084 440 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 SRGAP1Q7Z6B7 1085 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 PPFIBP1Q86W92 1011 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 CAPZA3Q96KX2 299 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
SCARF1-209ENST00000576012 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SCARF1-209ENST00000576012 DNAJC21Q5F1R6 531 aaKnown RBP16.59■□□□□ 0.25
SCARF1-209ENST00000576012 USP49Q70CQ1 688 aa16.59■□□□□ 0.25
SCARF1-209ENST00000576012 TEX13AQ9BXU3 409 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-209ENST00000576012 HOXB7P09629 217 aa16.59■□□□□ 0.25
SCARF1-209ENST00000576012 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
SCARF1-209ENST00000576012 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
SCARF1-209ENST00000576012 TUBB4AP04350 444 aa16.58■□□□□ 0.25
SCARF1-209ENST00000576012 KCNJ6P48051 423 aa16.58■□□□□ 0.25
SCARF1-209ENST00000576012 CASP8Q14790 479 aa16.58■□□□□ 0.25
SCARF1-209ENST00000576012 IGSF22Q8N9C0 903 aa16.58■□□□□ 0.25
SCARF1-209ENST00000576012 ATG3Q9NT62 314 aa16.58■□□□□ 0.25
SCARF1-209ENST00000576012 STX10O60499 249 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 SLC9C2Q5TAH2 1124 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 SEC31BQ9NQW1 1179 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 MAN1B1Q9UKM7 699 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 JRKLQ9Y4A0 524 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.24
SCARF1-209ENST00000576012 NOM1Q5C9Z4 860 aaKnown RBP16.58■□□□□ 0.24
SCARF1-209ENST00000576012 ZMYM1Q5SVZ6 1142 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 BRAPQ7Z569 592 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.58■□□□□ 0.24
SCARF1-209ENST00000576012 SLC26A6Q9BXS9 759 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.24
SCARF1-209ENST00000576012 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ATP8B1O43520 1251 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 RFX5P48382 616 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 METAP2P50579 478 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 TRDNQ13061 729 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 AKR1B15C9JRZ8 316 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 SRGAP2O75044 1071 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ERLIN1O75477 346 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ADORA1P30542 326 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 CASP14P31944 242 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ANTXR2P58335 489 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 DSCC1Q9BVC3 393 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 TUBE1Q9UJT0 475 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 GUCA1BQ9UMX6 200 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 BTBD18B2RXH4 712 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 TRIM29Q14134 588 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 TTC39AQ5SRH9 613 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ICE2Q659A1 982 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 EEF2KMTQ96G04 330 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 SLF1Q9BQI6 1058 aa16.57■□□□□ 0.24
SCARF1-209ENST00000576012 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
SCARF1-209ENST00000576012 ZNF213O14771 459 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 ZKSCAN3Q9BRR0 538 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 MAPK8IP1Q9UQF2 711 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 CTAGE9A4FU28 777 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 B4E1Z4 1266 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 LIG3P49916 1009 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 BRD3Q15059 726 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 JMYQ8N9B5 988 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 IP6K1Q92551 441 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 EHD4Q9H223 541 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
SCARF1-209ENST00000576012 CDC23Q9UJX2 597 aa16.56■□□□□ 0.24
SCARF1-209ENST00000576012 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-209ENST00000576012 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
SCARF1-209ENST00000576012 MAP2K7O14733 419 aa16.55■□□□□ 0.24
SCARF1-209ENST00000576012 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
SCARF1-209ENST00000576012 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms