RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 EYA2O00167 538 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 SEMA3EO15041 775 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 ELNP15502 786 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 BMP8BP34820 402 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
SMG6-218ENST00000575454 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 GADL1Q6ZQY3 521 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
SMG6-218ENST00000575454 IDI2Q9BXS1 227 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
SMG6-218ENST00000575454 ZBTB22O15209 634 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 MAP3K10Q02779 954 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
SMG6-218ENST00000575454 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 PAWRQ96IZ0 340 aaKnown RBP11.23□□□□□ -0.61
SMG6-218ENST00000575454 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 PTPRCP08575 1304 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 SALL1Q9NSC2 1324 aa11.23□□□□□ -0.61
SMG6-218ENST00000575454 SPTBN5Q9NRC6 3674 aaKnown RBP11.22□□□□□ -0.61
SMG6-218ENST00000575454 PRDX5P30044 214 aa11.22□□□□□ -0.61
SMG6-218ENST00000575454 GCLCP48506 637 aaPredicted RBP11.22□□□□□ -0.61
SMG6-218ENST00000575454 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMG6-218ENST00000575454 FAM110CQ1W6H9 321 aa11.22□□□□□ -0.61
SMG6-218ENST00000575454 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
SMG6-218ENST00000575454 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
SMG6-218ENST00000575454 CEP126Q9P2H0 1117 aa11.22□□□□□ -0.61
SMG6-218ENST00000575454 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
SMG6-218ENST00000575454 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
SMG6-218ENST00000575454 LAMB1P07942 1786 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 TRIM75PA6NK02 468 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 SOX1O00570 391 aaPredicted RBP11.21□□□□□ -0.61
SMG6-218ENST00000575454 CIAO1O76071 339 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 HMGCRP04035 888 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 RGS3P49796 1198 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 ATP2B3Q16720 1220 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.61
SMG6-218ENST00000575454 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 ANKRD13CQ8N6S4 541 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
SMG6-218ENST00000575454 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 GDF15Q99988 308 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMG6-218ENST00000575454 USP44Q9H0E7 712 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
SMG6-218ENST00000575454 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
SMG6-218ENST00000575454 LAMA2P24043 3122 aaKnown RBP11.2□□□□□ -0.62
SMG6-218ENST00000575454 ATRNL1Q5VV63 1379 aa11.2□□□□□ -0.62
SMG6-218ENST00000575454 RPTORQ8N122 1335 aa11.2□□□□□ -0.62
SMG6-218ENST00000575454 MYH3P11055 1940 aa11.2□□□□□ -0.62
SMG6-218ENST00000575454 TBC1D12O60347 775 aa11.2□□□□□ -0.62
SMG6-218ENST00000575454 LRIT3Q3SXY7 679 aa11.2□□□□□ -0.62
SMG6-218ENST00000575454 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
SMG6-218ENST00000575454 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
SMG6-218ENST00000575454 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
SMG6-218ENST00000575454 GAKO14976 1311 aa11.19□□□□□ -0.62
SMG6-218ENST00000575454 NPM3O75607 178 aaKnown RBP11.19□□□□□ -0.62
SMG6-218ENST00000575454 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
SMG6-218ENST00000575454 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
SMG6-218ENST00000575454 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
SMG6-218ENST00000575454 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
SMG6-218ENST00000575454 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
SMG6-218ENST00000575454 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
SMG6-218ENST00000575454 C11orf49Q9H6J7 331 aa11.19□□□□□ -0.62
SMG6-218ENST00000575454 STXBP5LQ9Y2K9 1186 aa11.19□□□□□ -0.62
SMG6-218ENST00000575454 PDS5AQ29RF7 1337 aaKnown RBP11.18□□□□□ -0.62
SMG6-218ENST00000575454 SH3BP5LQ7L8J4 393 aa11.18□□□□□ -0.62
SMG6-218ENST00000575454 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
SMG6-218ENST00000575454 TDHQ8IZJ6 230 aa11.18□□□□□ -0.62
SMG6-218ENST00000575454 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
SMG6-218ENST00000575454 OSBPL5Q9H0X9 879 aaPredicted RBP11.18□□□□□ -0.62
SMG6-218ENST00000575454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMG6-218ENST00000575454 SPEF2Q9C093 1822 aa11.18□□□□□ -0.62
SMG6-218ENST00000575454 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
SMG6-218ENST00000575454 ANP32CO43423 234 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 BTDP43251 543 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 GSTO1P78417 241 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 SPP2Q13103 211 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 PICALMQ13492 652 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 TREML2Q5T2D2 321 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 DIS3LQ8TF46 1054 aaKnown RBP11.17□□□□□ -0.62
SMG6-218ENST00000575454 AS3MTQ9HBK9 375 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 ABCF2Q9UG63 623 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 GJD2Q9UKL4 321 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 ZMYND8Q9ULU4 1186 aaPredicted RBP11.17□□□□□ -0.62
SMG6-218ENST00000575454 TTC28Q96AY4 2481 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 EYSQ5T1H1 3165 aa11.17□□□□□ -0.62
SMG6-218ENST00000575454 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 GPR75-ASB3A0A0A6YYF3 556 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 LDHCP07864 332 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
SMG6-218ENST00000575454 XRCC5P13010 732 aaKnown RBP11.16□□□□□ -0.62
SMG6-218ENST00000575454 MAGEA10P43363 369 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms