RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PSMC4P43686 418 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 MTX1Q13505 466 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 MOGSQ13724 837 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 PTPRFP10586 1907 aa12.93□□□□□ -0.34
TVP23B-208ENST00000575261 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 A0A0G2JLL6 359 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 PHF20L1A8MW92 1017 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 CEP290O15078 2479 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 OSBPP22059 807 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 CTGFP29279 349 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 BTDP43251 543 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 RANBP2P49792 3224 aaKnown RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 TIMM10P62072 90 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 TFCP2Q12800 502 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 PICALMQ13492 652 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 PRRT2Q7Z6L0 340 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 RAET1EQ8TD07 263 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-208ENST00000575261 ZHX2Q9Y6X8 837 aa12.92□□□□□ -0.34
TVP23B-208ENST00000575261 MGAMO43451 1857 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 PHIPQ8WWQ0 1821 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 PTPRAP18433 802 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 FCGRTP55899 365 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
TVP23B-208ENST00000575261 GPAT2Q6NUI2 795 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 SH3BP5LQ7L8J4 393 aa12.91□□□□□ -0.34
TVP23B-208ENST00000575261 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-208ENST00000575261 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
TVP23B-208ENST00000575261 CCER2I3L3R5 266 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
TVP23B-208ENST00000575261 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.34
TVP23B-208ENST00000575261 CYP2C8P10632 490 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 BCRP11274 1271 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 GRK4P32298 578 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 MAP3K10Q02779 954 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 MECOMQ03112 1051 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 DDX4Q9NQI0 724 aaKnown RBP12.9□□□□□ -0.34
TVP23B-208ENST00000575261 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 AFG3L2Q9Y4W6 797 aa12.9□□□□□ -0.34
TVP23B-208ENST00000575261 GPR75-ASB3A0A0A6YYF3 556 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 GNAI2P04899 355 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 TRIM27P14373 513 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 GSTO1P78417 241 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 PRKCZQ05513 592 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 MTFR1Q15390 333 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 GORABQ5T7V8 394 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 GADL1Q6ZQY3 521 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 SLAIN1Q8ND83 568 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 HMG20BQ9P0W2 317 aa12.89□□□□□ -0.35
TVP23B-208ENST00000575261 ATAD5Q96QE3 1844 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 TRIM75PA6NK02 468 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
TVP23B-208ENST00000575261 MAP4K4O95819 1239 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-208ENST00000575261 LDHCP07864 332 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 ARID4AP29374 1257 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-208ENST00000575261 RHBDL3P58872 404 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 UBXN2AP68543 259 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 SPATA5Q8NB90 893 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 SMCR8Q8TEV9 937 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-208ENST00000575261 ZNF384Q8TF68 577 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.88□□□□□ -0.35
TVP23B-208ENST00000575261 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 SZT2Q5T011 3432 aa12.88□□□□□ -0.35
TVP23B-208ENST00000575261 TBC1D12O60347 775 aa12.87□□□□□ -0.35
TVP23B-208ENST00000575261 SLURP2P0DP57 97 aa12.87□□□□□ -0.35
TVP23B-208ENST00000575261 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
TVP23B-208ENST00000575261 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-208ENST00000575261 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
TVP23B-208ENST00000575261 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
TVP23B-208ENST00000575261 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
TVP23B-208ENST00000575261 PNMA3Q9UL41 463 aa12.87□□□□□ -0.35
TVP23B-208ENST00000575261 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
TVP23B-208ENST00000575261 PNMA6EA0A0J9YXQ4 647 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 GJB1P08034 283 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 CCL5P13501 91 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 MCAMP43121 646 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 GJA8P48165 433 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
TVP23B-208ENST00000575261 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
TVP23B-208ENST00000575261 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
TVP23B-208ENST00000575261 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
TVP23B-208ENST00000575261 OSBPL5Q9H0X9 879 aaPredicted RBP12.86□□□□□ -0.35
TVP23B-208ENST00000575261 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.86□□□□□ -0.35
TVP23B-208ENST00000575261 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.86□□□□□ -0.35
TVP23B-208ENST00000575261 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
TVP23B-208ENST00000575261 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms