RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 BRI3BPQ8WY22 251 aa24.15■■□□□ 1.46
SCARF1-208ENST00000574545 LRP2BPQ9P2M1 347 aa24.15■■□□□ 1.46
SCARF1-208ENST00000574545 DDTLA6NHG4 134 aaPredicted RBP24.14■■□□□ 1.45
SCARF1-208ENST00000574545 MAP4K4O95819 1239 aaPredicted RBP24.14■■□□□ 1.45
SCARF1-208ENST00000574545 ZAP70P43403 619 aa24.14■■□□□ 1.45
SCARF1-208ENST00000574545 HSP90AB4PQ58FF6 505 aa24.14■■□□□ 1.45
SCARF1-208ENST00000574545 CTU1Q7Z7A3 348 aaKnown RBP24.14■■□□□ 1.45
SCARF1-208ENST00000574545 OTUD5Q96G74 571 aa24.14■■□□□ 1.45
SCARF1-208ENST00000574545 IGSF3O75054 1194 aa24.13■■□□□ 1.45
SCARF1-208ENST00000574545 GTF2A2P52657 109 aa24.13■■□□□ 1.45
SCARF1-208ENST00000574545 CHMP4BQ9H444 224 aaKnown RBP24.13■■□□□ 1.45
SCARF1-208ENST00000574545 AK9Q5TCS8 1911 aa24.13■■□□□ 1.45
SCARF1-208ENST00000574545 PHF20L1A8MW92 1017 aa24.12■■□□□ 1.45
SCARF1-208ENST00000574545 IRF6O14896 467 aa24.12■■□□□ 1.45
SCARF1-208ENST00000574545 NOL9Q5SY16 702 aaKnown RBP24.12■■□□□ 1.45
SCARF1-208ENST00000574545 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.12■■□□□ 1.45
SCARF1-208ENST00000574545 PIH1D3Q9NQM4 214 aaKnown RBP24.12■■□□□ 1.45
SCARF1-208ENST00000574545 CCL15-CCL14A0A0B4J2E2 113 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 FKTNO75072 461 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 HMMRO75330 724 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 PPP4CP60510 307 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 PPATQ06203 517 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 PPIL2Q13356 520 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 CCL15Q16663 113 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 OTUD7BQ6GQQ9 843 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 AACSQ86V21 672 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 IL1RAPL2Q9NP60 686 aa24.11■■□□□ 1.45
SCARF1-208ENST00000574545 SLURP2P0DP57 97 aa24.1■■□□□ 1.45
SCARF1-208ENST00000574545 CRHR2Q13324 411 aa24.1■■□□□ 1.45
SCARF1-208ENST00000574545 PICALMQ13492 652 aa24.1■■□□□ 1.45
SCARF1-208ENST00000574545 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
SCARF1-208ENST00000574545 KIF1BPQ96EK5 621 aa24.1■■□□□ 1.45
SCARF1-208ENST00000574545 MYO5AQ9Y4I1 1855 aaKnown RBP24.1■■□□□ 1.45
SCARF1-208ENST00000574545 NAA16Q6N069 864 aaPredicted RBP24.09■■□□□ 1.45
SCARF1-208ENST00000574545 FAM43AQ8N2R8 423 aa24.08■■□□□ 1.45
SCARF1-208ENST00000574545 KCNH4Q9UQ05 1017 aa24.08■■□□□ 1.45
SCARF1-208ENST00000574545 DOCK2Q92608 1830 aa24.07■■□□□ 1.44
SCARF1-208ENST00000574545 TBC1D12O60347 775 aa24.07■■□□□ 1.44
SCARF1-208ENST00000574545 RAB11FIP3O75154 756 aa24.07■■□□□ 1.44
SCARF1-208ENST00000574545 ZSCAN29Q8IWY8 852 aaPredicted RBP24.07■■□□□ 1.44
SCARF1-208ENST00000574545 SH3RF3Q8TEJ3 882 aaPredicted RBP24.07■■□□□ 1.44
SCARF1-208ENST00000574545 OSBPL5Q9H0X9 879 aaPredicted RBP24.07■■□□□ 1.44
SCARF1-208ENST00000574545 ANTXR1Q9H6X2 564 aa24.07■■□□□ 1.44
SCARF1-208ENST00000574545 AATFQ9NY61 560 aaKnown RBP eCLIP24.07■■□□□ 1.44
SCARF1-208ENST00000574545 NDUFB9Q9Y6M9 179 aa24.07■■□□□ 1.44
SCARF1-208ENST00000574545 COL2A1P02458 1487 aaPredicted RBP24.07■■□□□ 1.44
SCARF1-208ENST00000574545 CCDC85CA6NKD9 419 aa24.06■■□□□ 1.44
SCARF1-208ENST00000574545 CETPP11597 493 aa24.06■■□□□ 1.44
SCARF1-208ENST00000574545 SNAPC2Q13487 334 aa24.06■■□□□ 1.44
SCARF1-208ENST00000574545 TEX11Q8IYF3 940 aa24.06■■□□□ 1.44
SCARF1-208ENST00000574545 CLASRPQ8N2M8 674 aaKnown RBP24.06■■□□□ 1.44
SCARF1-208ENST00000574545 MAST2Q6P0Q8 1798 aa24.06■■□□□ 1.44
SCARF1-208ENST00000574545 BTBD19C9JJ37 291 aa24.05■■□□□ 1.44
SCARF1-208ENST00000574545 BAG3O95817 575 aa24.05■■□□□ 1.44
SCARF1-208ENST00000574545 MOGSQ13724 837 aa24.05■■□□□ 1.44
SCARF1-208ENST00000574545 PKN2Q16513 984 aaKnown RBP24.05■■□□□ 1.44
SCARF1-208ENST00000574545 APBB1O00213 710 aa24.04■■□□□ 1.44
SCARF1-208ENST00000574545 SCYL3Q8IZE3 742 aa24.04■■□□□ 1.44
SCARF1-208ENST00000574545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.04■■□□□ 1.44
SCARF1-208ENST00000574545 ZCCHC17Q9NP64 241 aaKnown RBP24.04■■□□□ 1.44
SCARF1-208ENST00000574545 CTNND1O60716 968 aaKnown RBP24.02■■□□□ 1.44
SCARF1-208ENST00000574545 IDH1O75874 414 aaKnown RBP24.02■■□□□ 1.44
SCARF1-208ENST00000574545 PLCG2P16885 1265 aa24.02■■□□□ 1.44
SCARF1-208ENST00000574545 PTPRAP18433 802 aa24.02■■□□□ 1.44
SCARF1-208ENST00000574545 CYP7A1P22680 504 aa24.02■■□□□ 1.44
SCARF1-208ENST00000574545 CAP1Q01518 475 aa24.02■■□□□ 1.44
SCARF1-208ENST00000574545 TAF1CQ15572 869 aaPredicted RBP24.02■■□□□ 1.44
SCARF1-208ENST00000574545 NOL10Q9BSC4 688 aaKnown RBP24.02■■□□□ 1.44
SCARF1-208ENST00000574545 ZFYVE28Q9HCC9 887 aa24.02■■□□□ 1.44
SCARF1-208ENST00000574545 CXCL11O14625 94 aa24.01■■□□□ 1.43
SCARF1-208ENST00000574545 RGS19P49795 217 aa24.01■■□□□ 1.43
SCARF1-208ENST00000574545 DYNLL1P63167 89 aaKnown RBP24.01■■□□□ 1.43
SCARF1-208ENST00000574545 SP3Q02447 781 aa24.01■■□□□ 1.43
SCARF1-208ENST00000574545 TMED8Q6PL24 325 aaPredicted RBP24.01■■□□□ 1.43
SCARF1-208ENST00000574545 HPS5Q9UPZ3 1129 aa24.01■■□□□ 1.43
SCARF1-208ENST00000574545 FAM196BA6NMK8 535 aa24■■□□□ 1.43
SCARF1-208ENST00000574545 IFIT2P09913 472 aaKnown RBP24■■□□□ 1.43
SCARF1-208ENST00000574545 FBXO46Q6PJ61 603 aaPredicted RBP24■■□□□ 1.43
SCARF1-208ENST00000574545 METTL16Q86W50 562 aaKnown RBP24■■□□□ 1.43
SCARF1-208ENST00000574545 TGFBRAP1Q8WUH2 860 aa24■■□□□ 1.43
SCARF1-208ENST00000574545 AFG3L2Q9Y4W6 797 aa24■■□□□ 1.43
SCARF1-208ENST00000574545 ZHX2Q9Y6X8 837 aa24■■□□□ 1.43
SCARF1-208ENST00000574545 CDK5RAP2Q96SN8 1893 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 RRP1BQ14684 758 aaKnown RBP23.99■■□□□ 1.43
SCARF1-208ENST00000574545 OTOP1Q7RTM1 612 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 ANKRD23Q86SG2 305 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 MAPKAPK5Q8IW41 473 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 MAGEB6Q8N7X4 407 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 ERO1AQ96HE7 468 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 DHX36Q9H2U1 1008 aaKnown RBP23.99■■□□□ 1.43
SCARF1-208ENST00000574545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.99■■□□□ 1.43
SCARF1-208ENST00000574545 FLT1P17948 1338 aa23.99■■□□□ 1.43
SCARF1-208ENST00000574545 HTTP42858 3142 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 TLR2O60603 784 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 MAP3K12Q12852 859 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 GPAT2Q6NUI2 795 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 CD99L2Q8TCZ2 262 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 PICK1Q9NRD5 415 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 PI4KBQ9UBF8 816 aa23.98■■□□□ 1.43
SCARF1-208ENST00000574545 SIPA1L1O43166 1804 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms