RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 NOL9Q5SY16 702 aaKnown RBP21.43■■□□□ 1.02
SMG6-214ENST00000573827 SLF2Q8IX21 1173 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 SNRKQ9NRH2 765 aa21.43■■□□□ 1.02
SMG6-214ENST00000573827 CCL15-CCL14A0A0B4J2E2 113 aa21.42■■□□□ 1.02
SMG6-214ENST00000573827 CYP2E1P05181 493 aaPredicted RBP21.42■■□□□ 1.02
SMG6-214ENST00000573827 CCL15Q16663 113 aa21.42■■□□□ 1.02
SMG6-214ENST00000573827 EXOC6BQ9Y2D4 811 aa21.42■■□□□ 1.02
SMG6-214ENST00000573827 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
SMG6-214ENST00000573827 DOCK2Q92608 1830 aa21.41■■□□□ 1.02
SMG6-214ENST00000573827 MS4A1P11836 297 aa21.41■■□□□ 1.02
SMG6-214ENST00000573827 PPATQ06203 517 aa21.41■■□□□ 1.02
SMG6-214ENST00000573827 MOGSQ13724 837 aa21.41■■□□□ 1.02
SMG6-214ENST00000573827 CCDC8Q9H0W5 538 aaPredicted RBP21.41■■□□□ 1.02
SMG6-214ENST00000573827 KCNH4Q9UQ05 1017 aa21.41■■□□□ 1.02
SMG6-214ENST00000573827 AK9Q5TCS8 1911 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 TTC39AQ5SRH9 613 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 C20orf194Q5TEA3 1177 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 ADGRA1Q86SQ6 560 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 PIH1D3Q9NQM4 214 aaKnown RBP21.4■■□□□ 1.02
SMG6-214ENST00000573827 RAI14Q9P0K7 980 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 DDX19BQ9UMR2 479 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 HPS5Q9UPZ3 1129 aa21.4■■□□□ 1.02
SMG6-214ENST00000573827 MYO5AQ9Y4I1 1855 aaKnown RBP21.4■■□□□ 1.02
SMG6-214ENST00000573827 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.02
SMG6-214ENST00000573827 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
SMG6-214ENST00000573827 ZAP70P43403 619 aa21.39■■□□□ 1.01
SMG6-214ENST00000573827 GSTO1P78417 241 aa21.39■■□□□ 1.01
SMG6-214ENST00000573827 PKN2Q16513 984 aaKnown RBP21.39■■□□□ 1.01
SMG6-214ENST00000573827 CCDC158Q5M9N0 1113 aa21.39■■□□□ 1.01
SMG6-214ENST00000573827 OTUD7BQ6GQQ9 843 aa21.39■■□□□ 1.01
SMG6-214ENST00000573827 MKI67P46013 3256 aaKnown RBP21.39■■□□□ 1.01
SMG6-214ENST00000573827 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
SMG6-214ENST00000573827 BTBD19C9JJ37 291 aa21.38■■□□□ 1.01
SMG6-214ENST00000573827 LDHCP07864 332 aa21.38■■□□□ 1.01
SMG6-214ENST00000573827 SNAPC2Q13487 334 aa21.38■■□□□ 1.01
SMG6-214ENST00000573827 RPAP2Q8IXW5 612 aaPredicted RBP21.38■■□□□ 1.01
SMG6-214ENST00000573827 CETPP11597 493 aa21.37■■□□□ 1.01
SMG6-214ENST00000573827 PPP4CP60510 307 aa21.37■■□□□ 1.01
SMG6-214ENST00000573827 PICALMQ13492 652 aa21.37■■□□□ 1.01
SMG6-214ENST00000573827 ZCCHC17Q9NP64 241 aaKnown RBP21.37■■□□□ 1.01
SMG6-214ENST00000573827 LRP2BPQ9P2M1 347 aa21.37■■□□□ 1.01
SMG6-214ENST00000573827 PDE4DIPQ5VU43 2346 aa21.37■■□□□ 1.01
SMG6-214ENST00000573827 FBXO46Q6PJ61 603 aaPredicted RBP21.36■■□□□ 1.01
SMG6-214ENST00000573827 OTOP1Q7RTM1 612 aa21.36■■□□□ 1.01
SMG6-214ENST00000573827 ERC1Q8IUD2 1116 aa21.36■■□□□ 1.01
SMG6-214ENST00000573827 RHPN1Q8TCX5 695 aa21.36■■□□□ 1.01
SMG6-214ENST00000573827 SH3RF3Q8TEJ3 882 aaPredicted RBP21.36■■□□□ 1.01
SMG6-214ENST00000573827 TBC1D12O60347 775 aa21.35■■□□□ 1.01
SMG6-214ENST00000573827 IGSF3O75054 1194 aa21.35■■□□□ 1.01
SMG6-214ENST00000573827 PDE3AQ14432 1141 aa21.35■■□□□ 1.01
SMG6-214ENST00000573827 TAF1CQ15572 869 aaPredicted RBP21.35■■□□□ 1.01
SMG6-214ENST00000573827 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.35■■□□□ 1.01
SMG6-214ENST00000573827 OSBPL5Q9H0X9 879 aaPredicted RBP21.35■■□□□ 1.01
SMG6-214ENST00000573827 NDUFB9Q9Y6M9 179 aa21.35■■□□□ 1.01
SMG6-214ENST00000573827 SIPA1L1O43166 1804 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 ADGRA2Q96PE1 1338 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 SP3Q02447 781 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
SMG6-214ENST00000573827 AACSQ86V21 672 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 SCYL3Q8IZE3 742 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 CD99L2Q8TCZ2 262 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 IL1RAPL2Q9NP60 686 aa21.34■■□□□ 1.01
SMG6-214ENST00000573827 KIAA0100Q14667 2235 aaKnown RBP21.33■■□□□ 1.01
SMG6-214ENST00000573827 CDK5RAP2Q96SN8 1893 aa21.33■■□□□ 1.01
SMG6-214ENST00000573827 PTPRAP18433 802 aa21.33■■□□□ 1.01
SMG6-214ENST00000573827 RRP1BQ14684 758 aaKnown RBP21.33■■□□□ 1.01
SMG6-214ENST00000573827 ZSCAN29Q8IWY8 852 aaPredicted RBP21.33■■□□□ 1.01
SMG6-214ENST00000573827 TEX11Q8IYF3 940 aa21.33■■□□□ 1.01
SMG6-214ENST00000573827 ANTXR1Q9H6X2 564 aa21.33■■□□□ 1.01
SMG6-214ENST00000573827 ZFYVE28Q9HCC9 887 aa21.33■■□□□ 1.01
SMG6-214ENST00000573827 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMG6-214ENST00000573827 PHIPQ8WWQ0 1821 aa21.33■■□□□ 1.01
SMG6-214ENST00000573827 FAM196BA6NMK8 535 aa21.32■■□□□ 1
SMG6-214ENST00000573827 CXCL11O14625 94 aa21.32■■□□□ 1
SMG6-214ENST00000573827 TLR2O60603 784 aa21.32■■□□□ 1
SMG6-214ENST00000573827 HSP90AB4PQ58FF6 505 aa21.32■■□□□ 1
SMG6-214ENST00000573827 GPAT2Q6NUI2 795 aa21.32■■□□□ 1
SMG6-214ENST00000573827 ANKRD23Q86SG2 305 aa21.32■■□□□ 1
SMG6-214ENST00000573827 ERO1AQ96HE7 468 aa21.32■■□□□ 1
SMG6-214ENST00000573827 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.32■■□□□ 1
SMG6-214ENST00000573827 AFG3L2Q9Y4W6 797 aa21.32■■□□□ 1
SMG6-214ENST00000573827 TRIM17Q9Y577 477 aa21.32■■□□□ 1
SMG6-214ENST00000573827 DOCK1Q14185 1865 aa21.31■■□□□ 1
SMG6-214ENST00000573827 CTNND1O60716 968 aaKnown RBP21.31■■□□□ 1
SMG6-214ENST00000573827 FOCADQ5VW36 1801 aa21.31■■□□□ 1
SMG6-214ENST00000573827 PTPRFP10586 1907 aa21.31■■□□□ 1
SMG6-214ENST00000573827 A0A0G2JLL6 359 aaPredicted RBP21.3■■□□□ 1
SMG6-214ENST00000573827 SOX10P56693 466 aa21.3■■□□□ 1
SMG6-214ENST00000573827 C17orf99Q6UX52 265 aa21.3■■□□□ 1
SMG6-214ENST00000573827 PRRT2Q7Z6L0 340 aaPredicted RBP21.3■■□□□ 1
SMG6-214ENST00000573827 METTL16Q86W50 562 aaKnown RBP21.3■■□□□ 1
SMG6-214ENST00000573827 KIF1BPQ96EK5 621 aa21.3■■□□□ 1
SMG6-214ENST00000573827 ZHX2Q9Y6X8 837 aa21.3■■□□□ 1
SMG6-214ENST00000573827 HMMRO75330 724 aa21.29■■□□□ 1
SMG6-214ENST00000573827 DNAJC18Q9H819 358 aa21.29■■□□□ 1
SMG6-214ENST00000573827 PTPN22Q9Y2R2 807 aa21.29■■□□□ 1
SMG6-214ENST00000573827 FLT1P17948 1338 aa21.29■■□□□ 1
SMG6-214ENST00000573827 ZSWIM8A7E2V4 1837 aa21.28■■□□□ 1
SMG6-214ENST00000573827 PDHXO00330 501 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms