RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 ST3GAL1Q11201 340 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 COL1A1P02452 1464 aaPredicted RBP16.31■□□□□ 0.2
TVP23A-207ENST00000573360 NMT2O60551 498 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 SPTY2D1Q68D10 685 aaPredicted RBP16.31■□□□□ 0.2
TVP23A-207ENST00000573360 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
TVP23A-207ENST00000573360 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 SPEF2Q9C093 1822 aa16.31■□□□□ 0.2
TVP23A-207ENST00000573360 DPEP1P16444 411 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 CUL4AQ13619 759 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 AKNAD1Q5T1N1 836 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 LRSAM1Q6UWE0 723 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 MYH3P11055 1940 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 GADD45BO75293 160 aaPredicted RBP16.3■□□□□ 0.2
TVP23A-207ENST00000573360 TSPY26PQ9H489 355 aa16.3■□□□□ 0.2
TVP23A-207ENST00000573360 PTPDC1A2A3K4 754 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 EPB41L2O43491 1005 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 ANTXR2P58335 489 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 TDRD7Q8NHU6 1098 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 ANKRD36CQ5JPF3 1778 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 BAG3O95817 575 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 DNM1Q05193 864 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 SLC12A7Q9Y666 1083 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 COL5A3P25940 1745 aaPredicted RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 CLEC17AQ6ZS10 378 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 AIFM3Q96NN9 605 aa16.29■□□□□ 0.2
TVP23A-207ENST00000573360 WDR33Q9C0J8 1336 aaKnown RBP16.29■□□□□ 0.2
TVP23A-207ENST00000573360 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
TVP23A-207ENST00000573360 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
TVP23A-207ENST00000573360 RIOK1Q9BRS2 568 aaKnown RBP16.28■□□□□ 0.2
TVP23A-207ENST00000573360 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
TVP23A-207ENST00000573360 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
TVP23A-207ENST00000573360 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
TVP23A-207ENST00000573360 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
TVP23A-207ENST00000573360 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.2
TVP23A-207ENST00000573360 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
TVP23A-207ENST00000573360 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.27■□□□□ 0.2
TVP23A-207ENST00000573360 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
TVP23A-207ENST00000573360 FAM196BA6NMK8 535 aa16.27■□□□□ 0.2
TVP23A-207ENST00000573360 GNAT2P19087 354 aa16.27■□□□□ 0.2
TVP23A-207ENST00000573360 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.2
TVP23A-207ENST00000573360 GTF3C6Q969F1 213 aa16.27■□□□□ 0.2
TVP23A-207ENST00000573360 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
TVP23A-207ENST00000573360 DCP1AQ9NPI6 582 aaPredicted RBP16.27■□□□□ 0.2
TVP23A-207ENST00000573360 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.2
TVP23A-207ENST00000573360 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
TVP23A-207ENST00000573360 BRD1O95696 1058 aa16.27■□□□□ 0.19
TVP23A-207ENST00000573360 POLD1P28340 1107 aa16.27■□□□□ 0.19
TVP23A-207ENST00000573360 WTAPQ15007 396 aa16.27■□□□□ 0.19
TVP23A-207ENST00000573360 CNKSR1Q969H4 720 aa16.27■□□□□ 0.19
TVP23A-207ENST00000573360 ORC3Q9UBD5 711 aaPredicted RBP16.27■□□□□ 0.19
TVP23A-207ENST00000573360 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.19
TVP23A-207ENST00000573360 RFX7Q2KHR2 1363 aa16.27■□□□□ 0.19
TVP23A-207ENST00000573360 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
TVP23A-207ENST00000573360 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
TVP23A-207ENST00000573360 KCNB2Q92953 911 aa16.26■□□□□ 0.19
TVP23A-207ENST00000573360 ZBTB43O43298 467 aa16.26■□□□□ 0.19
TVP23A-207ENST00000573360 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
TVP23A-207ENST00000573360 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
TVP23A-207ENST00000573360 LDHCP07864 332 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 SLC26A6Q9BXS9 759 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 SEMA3EO15041 775 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 EXOSC10Q01780 885 aaKnown RBP16.25■□□□□ 0.19
TVP23A-207ENST00000573360 UBE2Q2Q8WVN8 375 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
TVP23A-207ENST00000573360 EYA3Q99504 573 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 MPHOSPH10O00566 681 aaKnown RBP16.25■□□□□ 0.19
TVP23A-207ENST00000573360 RGL2O15211 777 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 ESR2Q92731 530 aa16.25■□□□□ 0.19
TVP23A-207ENST00000573360 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
TVP23A-207ENST00000573360 ECE2O60344 883 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 PLCD1P51178 756 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 TSGA10IPQ3SY00 556 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 IQCA1Q86XH1 822 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 KRT23Q9C075 422 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
TVP23A-207ENST00000573360 RNF41Q9H4P4 317 aaPredicted RBP16.24■□□□□ 0.19
TVP23A-207ENST00000573360 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms