RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CSADQ9Y600 493 aa21.3■■□□□ 1
SMG6-212ENST00000573153 COL2A1P02458 1487 aaPredicted RBP21.3■■□□□ 1
SMG6-212ENST00000573153 CDK5RAP2Q96SN8 1893 aa21.29■■□□□ 1
SMG6-212ENST00000573153 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
SMG6-212ENST00000573153 RGS19P49795 217 aa21.29■■□□□ 1
SMG6-212ENST00000573153 ERO1BQ86YB8 467 aa21.29■■□□□ 1
SMG6-212ENST00000573153 CCDC8Q9H0W5 538 aaPredicted RBP21.29■■□□□ 1
SMG6-212ENST00000573153 PIH1D3Q9NQM4 214 aaKnown RBP21.29■■□□□ 1
SMG6-212ENST00000573153 PHIPQ8WWQ0 1821 aa21.28■■□□□ 1
SMG6-212ENST00000573153 ZAP70P43403 619 aa21.28■■□□□ 1
SMG6-212ENST00000573153 PPIL2Q13356 520 aa21.28■■□□□ 1
SMG6-212ENST00000573153 GORABQ5T7V8 394 aa21.28■■□□□ 1
SMG6-212ENST00000573153 HOOK2Q96ED9 719 aa21.28■■□□□ 1
SMG6-212ENST00000573153 FOCADQ5VW36 1801 aa21.27■■□□□ 1
SMG6-212ENST00000573153 CCL15-CCL14A0A0B4J2E2 113 aa21.27■■□□□ 1
SMG6-212ENST00000573153 CCDC85CA6NKD9 419 aa21.27■■□□□ 1
SMG6-212ENST00000573153 FKTNO75072 461 aa21.27■■□□□ 1
SMG6-212ENST00000573153 OS9Q13438 667 aaPredicted RBP21.27■■□□□ 1
SMG6-212ENST00000573153 CCL15Q16663 113 aa21.27■■□□□ 1
SMG6-212ENST00000573153 DDX19BQ9UMR2 479 aa21.27■■□□□ 1
SMG6-212ENST00000573153 KCNH4Q9UQ05 1017 aa21.27■■□□□ 1
SMG6-212ENST00000573153 GTF2A2P52657 109 aa21.26■□□□□ 0.99
SMG6-212ENST00000573153 TTC39AQ5SRH9 613 aa21.26■□□□□ 0.99
SMG6-212ENST00000573153 SLF2Q8IX21 1173 aa21.26■□□□□ 0.99
SMG6-212ENST00000573153 DOCK1Q14185 1865 aa21.26■□□□□ 0.99
SMG6-212ENST00000573153 ZSWIM8A7E2V4 1837 aa21.25■□□□□ 0.99
SMG6-212ENST00000573153 PPATQ06203 517 aa21.25■□□□□ 0.99
SMG6-212ENST00000573153 RAI14Q9P0K7 980 aa21.25■□□□□ 0.99
SMG6-212ENST00000573153 HPS5Q9UPZ3 1129 aa21.25■□□□□ 0.99
SMG6-212ENST00000573153 NDUFB9Q9Y6M9 179 aa21.25■□□□□ 0.99
SMG6-212ENST00000573153 AK9Q5TCS8 1911 aa21.25■□□□□ 0.99
SMG6-212ENST00000573153 PTPRFP10586 1907 aa21.24■□□□□ 0.99
SMG6-212ENST00000573153 BTBD19C9JJ37 291 aa21.24■□□□□ 0.99
SMG6-212ENST00000573153 PICALMQ13492 652 aa21.24■□□□□ 0.99
SMG6-212ENST00000573153 CCDC158Q5M9N0 1113 aa21.24■□□□□ 0.99
SMG6-212ENST00000573153 RPAP2Q8IXW5 612 aaPredicted RBP21.24■□□□□ 0.99
SMG6-212ENST00000573153 RHPN1Q8TCX5 695 aa21.24■□□□□ 0.99
SMG6-212ENST00000573153 ADGRA2Q96PE1 1338 aa21.24■□□□□ 0.99
SMG6-212ENST00000573153 MAP4K4O95819 1239 aaPredicted RBP21.23■□□□□ 0.99
SMG6-212ENST00000573153 PPP4CP60510 307 aa21.23■□□□□ 0.99
SMG6-212ENST00000573153 GSTO1P78417 241 aa21.23■□□□□ 0.99
SMG6-212ENST00000573153 PDE3AQ14432 1141 aa21.23■□□□□ 0.99
SMG6-212ENST00000573153 RRP1BQ14684 758 aaKnown RBP21.23■□□□□ 0.99
SMG6-212ENST00000573153 SH3RF3Q8TEJ3 882 aaPredicted RBP21.23■□□□□ 0.99
SMG6-212ENST00000573153 OSBPL5Q9H0X9 879 aaPredicted RBP21.23■□□□□ 0.99
SMG6-212ENST00000573153 CHMP4BQ9H444 224 aaKnown RBP21.23■□□□□ 0.99
SMG6-212ENST00000573153 ANTXR1Q9H6X2 564 aa21.23■□□□□ 0.99
SMG6-212ENST00000573153 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
SMG6-212ENST00000573153 LDHCP07864 332 aa21.22■□□□□ 0.99
SMG6-212ENST00000573153 PKN2Q16513 984 aaKnown RBP21.22■□□□□ 0.99
SMG6-212ENST00000573153 OTOP1Q7RTM1 612 aa21.22■□□□□ 0.99
SMG6-212ENST00000573153 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.22■□□□□ 0.99
SMG6-212ENST00000573153 LRP2BPQ9P2M1 347 aa21.22■□□□□ 0.99
SMG6-212ENST00000573153 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.22■□□□□ 0.99
SMG6-212ENST00000573153 FAM196BA6NMK8 535 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 TBC1D12O60347 775 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 CETPP11597 493 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 SNAPC2Q13487 334 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 FBXO46Q6PJ61 603 aaPredicted RBP21.21■□□□□ 0.99
SMG6-212ENST00000573153 AACSQ86V21 672 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 SCYL3Q8IZE3 742 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 CD99L2Q8TCZ2 262 aa21.21■□□□□ 0.99
SMG6-212ENST00000573153 ZCCHC17Q9NP64 241 aaKnown RBP21.21■□□□□ 0.99
SMG6-212ENST00000573153 DDX60LQ5H9U9 1706 aaKnown RBP21.21■□□□□ 0.99
SMG6-212ENST00000573153 IGSF3O75054 1194 aa21.2■□□□□ 0.98
SMG6-212ENST00000573153 TAF1CQ15572 869 aaPredicted RBP21.2■□□□□ 0.98
SMG6-212ENST00000573153 OTUD7BQ6GQQ9 843 aa21.2■□□□□ 0.98
SMG6-212ENST00000573153 NAA16Q6N069 864 aaPredicted RBP21.2■□□□□ 0.98
SMG6-212ENST00000573153 GPAT2Q6NUI2 795 aa21.2■□□□□ 0.98
SMG6-212ENST00000573153 ERC1Q8IUD2 1116 aa21.2■□□□□ 0.98
SMG6-212ENST00000573153 DNAJC18Q9H819 358 aa21.2■□□□□ 0.98
SMG6-212ENST00000573153 AATFQ9NY61 560 aaKnown RBP eCLIP21.2■□□□□ 0.98
SMG6-212ENST00000573153 PTPRAP18433 802 aa21.19■□□□□ 0.98
SMG6-212ENST00000573153 DYNLL1P63167 89 aaKnown RBP21.18■□□□□ 0.98
SMG6-212ENST00000573153 SP3Q02447 781 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 HSP90AB4PQ58FF6 505 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 ANKRD23Q86SG2 305 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 CCDC84Q86UT8 332 aaPredicted RBP21.18■□□□□ 0.98
SMG6-212ENST00000573153 TEX11Q8IYF3 940 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 AFG3L2Q9Y4W6 797 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 FLT1P17948 1338 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 ATAD5Q96QE3 1844 aa21.18■□□□□ 0.98
SMG6-212ENST00000573153 A0A0G2JLL6 359 aaPredicted RBP21.17■□□□□ 0.98
SMG6-212ENST00000573153 TLR2O60603 784 aa21.17■□□□□ 0.98
SMG6-212ENST00000573153 CTGFP29279 349 aa21.17■□□□□ 0.98
SMG6-212ENST00000573153 PRRT2Q7Z6L0 340 aaPredicted RBP21.17■□□□□ 0.98
SMG6-212ENST00000573153 METTL16Q86W50 562 aaKnown RBP21.17■□□□□ 0.98
SMG6-212ENST00000573153 ZSCAN29Q8IWY8 852 aaPredicted RBP21.17■□□□□ 0.98
SMG6-212ENST00000573153 KIF1BPQ96EK5 621 aa21.17■□□□□ 0.98
SMG6-212ENST00000573153 TRIM17Q9Y577 477 aa21.17■□□□□ 0.98
SMG6-212ENST00000573153 TNRC18O15417 2968 aaPredicted RBP21.17■□□□□ 0.98
SMG6-212ENST00000573153 LOC285556D6RIA3 1793 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 CXCL11O14625 94 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 CTNND1O60716 968 aaKnown RBP21.16■□□□□ 0.98
SMG6-212ENST00000573153 SOX10P56693 466 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 JAG1P78504 1218 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 C17orf99Q6UX52 265 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 ERO1AQ96HE7 468 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 ZFYVE28Q9HCC9 887 aa21.16■□□□□ 0.98
SMG6-212ENST00000573153 CENPFP49454 3210 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms