RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 CASC1Q6TDU7 716 aa27.95■■■□□ 2.07
TVP23A-206ENST00000572980 MAPKAPK5Q8IW41 473 aa27.95■■■□□ 2.07
TVP23A-206ENST00000572980 DDRGK1Q96HY6 314 aa27.95■■■□□ 2.07
TVP23A-206ENST00000572980 TMEM39BQ9GZU3 492 aa27.94■■■□□ 2.06
TVP23A-206ENST00000572980 OSBPL5Q9H0X9 879 aaPredicted RBP27.94■■■□□ 2.06
TVP23A-206ENST00000572980 ATP8A2Q9NTI2 1148 aa27.94■■■□□ 2.06
TVP23A-206ENST00000572980 FLT1P17948 1338 aa27.94■■■□□ 2.06
TVP23A-206ENST00000572980 CDC45O75419 566 aa27.94■■■□□ 2.06
TVP23A-206ENST00000572980 SDR42E1Q8WUS8 393 aa27.94■■■□□ 2.06
TVP23A-206ENST00000572980 PRKAB2O43741 272 aa27.93■■■□□ 2.06
TVP23A-206ENST00000572980 CCDC129Q6ZRS4 1044 aa27.93■■■□□ 2.06
TVP23A-206ENST00000572980 ZSCAN29Q8IWY8 852 aaPredicted RBP27.93■■■□□ 2.06
TVP23A-206ENST00000572980 TRAF5O00463 557 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 SUPT20HL1Q3ZLR7 823 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 ZFPM1Q8IX07 1006 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 CDCA5Q96FF9 252 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 DCP1AQ9NPI6 582 aaPredicted RBP27.92■■■□□ 2.06
TVP23A-206ENST00000572980 CDK5RAP2Q96SN8 1893 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 CCDC171Q6TFL3 1326 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 RAD50Q92878 1312 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 RPAP1Q9BWH6 1393 aaPredicted RBP27.92■■■□□ 2.06
TVP23A-206ENST00000572980 FOCADQ5VW36 1801 aa27.92■■■□□ 2.06
TVP23A-206ENST00000572980 PATL2C9JE40 543 aaKnown RBP27.91■■■□□ 2.06
TVP23A-206ENST00000572980 APPP05067 770 aa27.91■■■□□ 2.06
TVP23A-206ENST00000572980 PRAMEF18Q5VWM3 479 aa27.91■■■□□ 2.06
TVP23A-206ENST00000572980 DHX36Q9H2U1 1008 aaKnown RBP27.91■■■□□ 2.06
TVP23A-206ENST00000572980 NF2P35240 595 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 GIMAP6Q6P9H5 292 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 DLK2Q6UY11 383 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 ZNF589Q86UQ0 364 aaPredicted RBP27.9■■■□□ 2.06
TVP23A-206ENST00000572980 HOOK2Q96ED9 719 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 TEPSINQ96N21 525 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 NACAP1Q9BZK3 213 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 MKRN1Q9UHC7 482 aaKnown RBP27.9■■■□□ 2.06
TVP23A-206ENST00000572980 GSG1L2A8MUP6 293 aa27.9■■■□□ 2.06
TVP23A-206ENST00000572980 COL2A1P02458 1487 aaPredicted RBP27.89■■■□□ 2.06
TVP23A-206ENST00000572980 NBPF12Q5TAG4 269 aaPredicted RBP27.89■■■□□ 2.05
TVP23A-206ENST00000572980 MCM9Q9NXL9 1143 aa27.89■■■□□ 2.05
TVP23A-206ENST00000572980 ATRNL1Q5VV63 1379 aa27.89■■■□□ 2.05
TVP23A-206ENST00000572980 CSRNP1Q96S65 589 aa27.88■■■□□ 2.05
TVP23A-206ENST00000572980 SAP30BPQ9UHR5 308 aaKnown RBP27.88■■■□□ 2.05
TVP23A-206ENST00000572980 PALD1Q9ULE6 856 aa27.88■■■□□ 2.05
TVP23A-206ENST00000572980 DDTLA6NHG4 134 aaPredicted RBP27.87■■■□□ 2.05
TVP23A-206ENST00000572980 SGSM2O43147 1006 aa27.87■■■□□ 2.05
TVP23A-206ENST00000572980 SH3BP5LQ7L8J4 393 aa27.87■■■□□ 2.05
TVP23A-206ENST00000572980 AMOTL1Q8IY63 956 aa27.87■■■□□ 2.05
TVP23A-206ENST00000572980 PASKQ96RG2 1323 aa27.87■■■□□ 2.05
TVP23A-206ENST00000572980 POLR3DP05423 398 aaPredicted RBP27.86■■■□□ 2.05
TVP23A-206ENST00000572980 HLA-DOAP06340 250 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 FMR1Q06787 632 aaKnown RBP eCLIP27.86■■■□□ 2.05
TVP23A-206ENST00000572980 TTC6Q86TZ1 520 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 IFNL3Q8IZI9 196 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 ESYT1Q9BSJ8 1104 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 ZNF408Q9H9D4 720 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 PI4KBQ9UBF8 816 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 HSPD1P10809 573 aaKnown RBP27.86■■■□□ 2.05
TVP23A-206ENST00000572980 TDO2P48775 406 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 VPS53Q5VIR6 699 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 CDAN1Q8IWY9 1227 aa27.86■■■□□ 2.05
TVP23A-206ENST00000572980 MYH1P12882 1939 aa27.85■■■□□ 2.05
TVP23A-206ENST00000572980 NAPBQ9H115 298 aa27.85■■■□□ 2.05
TVP23A-206ENST00000572980 IL25Q9H293 177 aa27.85■■■□□ 2.05
TVP23A-206ENST00000572980 USP17L12C9JPN9 530 aa27.84■■■□□ 2.05
TVP23A-206ENST00000572980 USP17L21D6R901 530 aa27.84■■■□□ 2.05
TVP23A-206ENST00000572980 PPP1R12BO60237 982 aaPredicted RBP27.84■■■□□ 2.05
TVP23A-206ENST00000572980 CELF2O95319 508 aaKnown RBP27.84■■■□□ 2.05
TVP23A-206ENST00000572980 EPB41L4AQ9HCS5 686 aaPredicted RBP27.84■■■□□ 2.05
TVP23A-206ENST00000572980 ARPP21Q9UBL0 812 aaPredicted RBP27.84■■■□□ 2.05
TVP23A-206ENST00000572980 NAV1Q8NEY1 1877 aa27.84■■■□□ 2.05
TVP23A-206ENST00000572980 DCAF15Q66K64 600 aa27.83■■■□□ 2.05
TVP23A-206ENST00000572980 KIAA1211Q6ZU35 1233 aa27.83■■■□□ 2.05
TVP23A-206ENST00000572980 ALX1Q15699 326 aa27.82■■■□□ 2.04
TVP23A-206ENST00000572980 CTR9Q6PD62 1173 aa27.82■■■□□ 2.04
TVP23A-206ENST00000572980 FOXP4Q8IVH2 680 aaPredicted RBP27.82■■■□□ 2.04
TVP23A-206ENST00000572980 DSCC1Q9BVC3 393 aa27.82■■■□□ 2.04
TVP23A-206ENST00000572980 FOXP2O15409 715 aa27.82■■■□□ 2.04
TVP23A-206ENST00000572980 SLC4A8Q2Y0W8 1093 aa27.82■■■□□ 2.04
TVP23A-206ENST00000572980 SBK1Q52WX2 424 aa27.82■■■□□ 2.04
TVP23A-206ENST00000572980 BAZ2AQ9UIF9 1905 aaKnown RBP27.81■■■□□ 2.04
TVP23A-206ENST00000572980 TRPM7Q96QT4 1865 aa27.81■■■□□ 2.04
TVP23A-206ENST00000572980 CST9Q5W186 159 aa27.81■■■□□ 2.04
TVP23A-206ENST00000572980 MIGA2Q7L4E1 593 aa27.81■■■□□ 2.04
TVP23A-206ENST00000572980 CRACR2BQ8N4Y2 399 aaPredicted RBP27.81■■■□□ 2.04
TVP23A-206ENST00000572980 C2orf69Q8N8R5 385 aa27.81■■■□□ 2.04
TVP23A-206ENST00000572980 TRIM34Q9BYJ4 488 aa27.81■■■□□ 2.04
TVP23A-206ENST00000572980 HERC5Q9UII4 1024 aaKnown RBP27.81■■■□□ 2.04
TVP23A-206ENST00000572980 TBC1D12O60347 775 aa27.8■■■□□ 2.04
TVP23A-206ENST00000572980 FGAP02671 866 aa27.8■■■□□ 2.04
TVP23A-206ENST00000572980 PLCD1P51178 756 aa27.8■■■□□ 2.04
TVP23A-206ENST00000572980 FKBP1BP68106 108 aa27.8■■■□□ 2.04
TVP23A-206ENST00000572980 TTLL12Q14166 644 aaPredicted RBP27.8■■■□□ 2.04
TVP23A-206ENST00000572980 DDX60LQ5H9U9 1706 aaKnown RBP27.8■■■□□ 2.04
TVP23A-206ENST00000572980 C12orf60Q5U649 245 aa27.8■■■□□ 2.04
TVP23A-206ENST00000572980 GBA2Q9HCG7 927 aaPredicted RBP27.8■■■□□ 2.04
TVP23A-206ENST00000572980 SERPINB13Q9UIV8 391 aa27.8■■■□□ 2.04
TVP23A-206ENST00000572980 SSC5DA1L4H1 1573 aa27.79■■■□□ 2.04
TVP23A-206ENST00000572980 EHD4Q9H223 541 aa27.79■■■□□ 2.04
TVP23A-206ENST00000572980 ZMYM6O95789 1325 aa27.79■■■□□ 2.04
TVP23A-206ENST00000572980 MINDY4BA8MYZ0 360 aa27.78■■■□□ 2.04
TVP23A-206ENST00000572980 MAP3K10Q02779 954 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms